Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 RNU6-1103P-201ENST00000384150 107 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 UBE2FP1-201ENST00000416536 447 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 MTCO3P30-201ENST00000426425 670 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 MTND3P21-201ENST00000433774 331 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 RPS3AP14-201ENST00000483907 780 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 HMGN1P28-201ENST00000521340 364 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 OR5G4P-201ENST00000525251 760 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC109635.4-202ENST00000531666 412 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC027807.1-201ENST00000559921 996 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC126118.1-201ENST00000607744 628 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC019176.2-201ENST00000611579 315 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AL391261.4-201ENST00000616012 481 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 SEPT14P19-203ENST00000633205 211 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 MIR6863-201ENST00000636112 90 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC138649.5-201ENST00000637456 137 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 AC009093.8-201ENST00000641769 292 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 TAB3P1-202ENST00000452645 1634 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 DDX10P1-201ENST00000448545 1933 ntBASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.8□□□□□ -1.8
TBC1D3EA0A087X179 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 MAPK10-253ENST00000641010 4072 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RNA5SP119-201ENST00000362715 117 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RNU6-223P-201ENST00000362830 107 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RNU6-511P-201ENST00000363496 107 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 SNORA7.2-201ENST00000364446 145 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RNA5SP44-201ENST00000410446 133 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RNA5SP306-201ENST00000411087 107 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 DUTP6-201ENST00000425573 462 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC137499.1-201ENST00000427602 88 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 FCF1P1-201ENST00000432690 571 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 KCTD9P3-201ENST00000434597 1169 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RPL7P28-201ENST00000437739 740 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AL121871.1-201ENST00000443413 436 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC016696.1-201ENST00000446949 318 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 snoU13.22-201ENST00000459428 104 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 RPL7P49-201ENST00000471402 708 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC090572.1-201ENST00000519251 160 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC136619.2-201ENST00000563361 631 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 FAM60BP-201ENST00000578364 658 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 SNORD84-203ENST00000584275 78 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC069200.1-201ENST00000609511 323 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AC004696.1-201ENST00000614345 607 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 AL603758.1-201ENST00000618654 241 ntBASIC3.79□□□□□ -1.8
TBC1D3EA0A087X179 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms