Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU6-522P-201ENST00000364497 107 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 U3.12-201ENST00000364498 214 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.480-201ENST00000384364 102 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 EIF4E2P1-201ENST00000393781 255 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AL158156.1-201ENST00000422509 473 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AL365400.1-201ENST00000431854 640 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AL451139.1-201ENST00000434718 346 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 PRPS1P1-201ENST00000445305 876 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 Z92846.1-201ENST00000456203 268 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 TRBVA-201ENST00000498804 316 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 FAM206BP-201ENST00000510179 541 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU2-69P-201ENST00000516061 100 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC079905.1-201ENST00000549280 475 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.804-201ENST00000615262 101 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 SNORD39.4-201ENST00000620099 78 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC005899.6-201ENST00000620729 297 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 AC022418.1-201ENST00000624118 445 ntBASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
GTF3C3Q9Y5Q9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC118273.1-201ENST00000525324 3006 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU1-15P-201ENST00000353977 144 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 Y_RNA.33-201ENST00000362591 102 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 SNORD113-7-201ENST00000363762 77 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL591034.1-201ENST00000407447 340 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL591848.1-201ENST00000413092 322 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL645937.1-202ENST00000421799 937 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 SNRPEP4-201ENST00000435815 279 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL671855.1-201ENST00000446875 1203 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 HMGB1P30-201ENST00000492455 606 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC020593.1-201ENST00000507399 299 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC008716.1-201ENST00000511084 513 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 IGBP1P1-201ENST00000554337 1009 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AL118558.2-201ENST00000556294 238 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC087763.1-201ENST00000603391 286 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AP002360.3-201ENST00000607673 710 ntBASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GTF3C3Q9Y5Q9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 MT-TD-201ENST00000387419 68 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 RNA5SP219-201ENST00000390940 113 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 SNORA16.2-201ENST00000390991 127 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 Z97832.1-201ENST00000402490 328 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU2-68P-201ENST00000410878 191 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 BX682237.1-201ENST00000415016 335 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AL669831.1-202ENST00000428504 417 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 NDUFA5P4-201ENST00000436704 385 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 GTF2IP13-201ENST00000438487 386 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 SNRPEP8-201ENST00000442866 260 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC108475.1-201ENST00000507880 950 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 RNU6-507P-201ENST00000516045 100 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 RNA5SP73-201ENST00000516744 108 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 RN7SKP260-201ENST00000516907 149 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AP000763.2-201ENST00000540641 163 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 SYF2P1-201ENST00000550658 413 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC005668.1-201ENST00000571142 476 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 AC005261.5-201ENST00000596280 355 ntBASIC6.23□□□□□ -1.41
GTF3C3Q9Y5Q9 VN1R80P-201ENST00000597126 338 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms