Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RNA5SP283-201ENST00000365604 119 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-39P-201ENST00000384344 107 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 SNORA37-201ENST00000384504 129 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AL591034.1-201ENST00000407447 340 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-628P-201ENST00000410675 107 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RN7SKP53-201ENST00000411337 315 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC245054.1-201ENST00000420944 258 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 HMGB1P27-201ENST00000431429 603 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC009237.8-201ENST00000445492 379 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 NANOGNBP1-201ENST00000448444 480 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC132479.1-201ENST00000449160 144 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 FGF7P3-201ENST00000454645 303 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL37P6-201ENST00000460682 294 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RPS20P22-201ENST00000473700 357 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC079382.1-201ENST00000493346 557 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC025445.1-201ENST00000502728 300 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 RNA5SP291-201ENST00000517222 105 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 NCAPGP2-201ENST00000557911 754 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 AC012603.1-201ENST00000606424 528 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL4A3BPQ9Y5P4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-641P-201ENST00000384006 107 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-1103P-201ENST00000384150 107 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-456P-201ENST00000384493 107 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-192P-201ENST00000391253 100 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AP000567.1-201ENST00000406413 156 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 U3.42-201ENST00000408746 214 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU2-39P-201ENST00000410604 198 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNA5SP104-201ENST00000410989 118 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 BX842559.1-201ENST00000419615 532 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL17P36-201ENST00000420302 549 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 MTCO2P11-201ENST00000431069 680 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 CBWD4P-201ENST00000445695 655 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AL162151.2-201ENST00000448875 158 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL29P14-201ENST00000495837 428 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 VWA8P1-201ENST00000510889 176 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-927P-201ENST00000516199 100 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-352P-201ENST00000516908 107 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-1220P-201ENST00000517126 108 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 SUB1P2-201ENST00000556401 297 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AC012417.1-201ENST00000582307 1039 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AC090132.2-201ENST00000615881 347 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AL589994.2-201ENST00000621124 579 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 Z82217.1-201ENST00000625157 8149 ntBASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A3BPQ9Y5P4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 SNORA60-201ENST00000362396 134 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-282P-201ENST00000365357 103 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-741P-201ENST00000383889 107 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-701P-201ENST00000384059 107 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 Y_RNA.505-201ENST00000384489 102 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RNU6-1197P-201ENST00000391183 107 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 TAAR7P-201ENST00000436141 242 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 HMGB3P12-201ENST00000438745 556 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC013267.1-201ENST00000458227 267 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 RPL38P1-201ENST00000460914 211 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 AC010469.1-201ENST00000463864 576 ntBASIC4.55□□□□□ -1.68
COL4A3BPQ9Y5P4 PPIAP15-201ENST00000479662 484 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms