Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-615P-201ENST00000516065 106 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-111P-201ENST00000517179 105 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC093591.2-201ENST00000565254 3843 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR5701-3-201ENST00000578890 82 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR5701-1-201ENST00000585138 82 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC002545.1-201ENST00000592511 181 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AL499605.1-201ENST00000604628 403 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR5701-2-201ENST00000615634 82 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 MTND5P9-201ENST00000503854 1755 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC100778.3-201ENST00000580060 1750 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.20-201ENST00000362479 113 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-512P-201ENST00000364438 103 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.416-201ENST00000384014 113 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.785-201ENST00000384290 109 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 HMGN1P20-201ENST00000411849 300 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 EI24P1-201ENST00000416584 867 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC096920.1-201ENST00000423991 241 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC018638.3-201ENST00000461273 132 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC110792.1-201ENST00000491826 472 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RN7SL591P-201ENST00000496150 292 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU1-86P-201ENST00000516108 154 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU1-107P-201ENST00000516617 154 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-789P-201ENST00000517105 102 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 MIR5696-201ENST00000578474 85 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC012433.1-201ENST00000588916 398 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC123912.5-201ENST00000605470 343 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC009812.4-201ENST00000569134 1805 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AC104964.3-201ENST00000606115 2860 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AL450326.2-201ENST00000421913 1962 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 AL078621.3-201ENST00000623707 2042 ntBASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AL391684.1-202ENST00000641293 1636 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 GVINP1-202ENST00000531871 7271 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AL049555.1-201ENST00000562834 1933 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 RNA5SP131-201ENST00000365452 119 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 U3.42-201ENST00000408746 214 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.592-201ENST00000410274 109 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 RAC1P3-201ENST00000416129 580 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 TOMM20P4-201ENST00000427861 435 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AL159987.2-201ENST00000432754 307 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AC004383.1-201ENST00000438135 289 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AZGP1P2-201ENST00000454506 345 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AC010632.3-201ENST00000611377 369 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 AC243829.7-201ENST00000633081 225 ntBASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
PCDHGA11Q9Y5H2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms