Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AL359273.1-201ENST00000510918 627 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORA31.8-201ENST00000516327 108 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC008489.1-201ENST00000524271 483 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 CYCSP29-201ENST00000533731 318 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC069240.1-201ENST00000548774 375 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AL355836.1-201ENST00000555951 870 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC025884.1-201ENST00000556034 378 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AL121992.2-201ENST00000606262 256 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 DISC2.1-201ENST00000612827 205 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AP001486.3-201ENST00000615334 372 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AL354950.2-201ENST00000617939 290 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 C2orf27A-204ENST00000623058 969 ntBASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHGA3Q9Y5H0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.88-201ENST00000363029 99 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 Y_RNA.255-201ENST00000364581 97 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU6-996P-201ENST00000365438 107 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORA69-201ENST00000383895 132 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP239-201ENST00000410218 129 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RN7SKP27-201ENST00000410684 333 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RN7SKP167-201ENST00000411047 285 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC022028.1-201ENST00000412054 408 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL23AP26-201ENST00000412728 464 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 USP9YP6-201ENST00000413550 854 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 CALM2P2-201ENST00000428512 440 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 MTATP6P23-201ENST00000440153 476 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL23AP43-201ENST00000446445 471 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 NFU1P2-201ENST00000448700 469 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RPL21P104-201ENST00000464143 478 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC006512.1-201ENST00000468816 291 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC092451.1-201ENST00000480211 153 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AL163973.1-201ENST00000484753 577 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC146944.2-203ENST00000502493 354 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC139495.1-202ENST00000513164 354 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RNA5SP446-201ENST00000515955 82 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 SNORD60.2-201ENST00000516883 86 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU6-352P-201ENST00000516908 107 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC034105.3-201ENST00000565294 442 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 VN1R85P-201ENST00000601587 426 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 ARF4P1-201ENST00000605447 541 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 ZYXP1-201ENST00000617638 118 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 YWHAEP7-203ENST00000622054 312 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AC099654.14-201ENST00000638599 341 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 CPHL1P-201ENST00000461341 3407 ntBASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA3Q9Y5H0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
PCDHGA3Q9Y5H0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA3Q9Y5H0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms