Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC243829.7-201ENST00000633081 225 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 AL450472.1-202ENST00000637286 180 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RLIMP1-201ENST00000339626 1680 ntBASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHB11Q9Y5F2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.54-201ENST00000362766 105 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.200-201ENST00000364018 102 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RNA5SP30-201ENST00000365552 115 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 MIR521-1-201ENST00000384902 87 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AL139156.1-201ENST00000412785 841 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RNF10P1-201ENST00000418589 369 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 HSPD1P21-201ENST00000436541 245 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AL590399.6-201ENST00000446396 307 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 U8.21-201ENST00000459536 136 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RN7SL583P-201ENST00000475692 287 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RNA5SP228-201ENST00000516232 133 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 MIR1273C-201ENST00000578669 77 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC067852.4-201ENST00000590314 478 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC006557.5-201ENST00000603126 811 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC009314.1-201ENST00000603871 304 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AP000787.2-201ENST00000604432 568 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC118658.2-201ENST00000618697 459 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AC073869.8-201ENST00000641806 335 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AL121839.2-201ENST00000565058 6943 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 AL049555.1-201ENST00000562834 1933 ntBASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHB11Q9Y5F2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AC100778.3-201ENST00000580060 1750 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 UBE2L2-201ENST00000254302 429 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SNORA36C-201ENST00000384289 132 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SNORA70E-201ENST00000384492 135 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SNORD115-46-201ENST00000390982 71 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 MRPL35P1-201ENST00000404272 572 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AC138761.5-201ENST00000433967 325 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 COPS8P2-201ENST00000473228 627 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 RN7SL547P-201ENST00000490793 290 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AC091144.1-201ENST00000519573 138 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AP006245.2-201ENST00000522004 300 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 TRAV37-201ENST00000553906 342 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 RNA5SP439-201ENST00000617595 124 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.46□□□□□ -1.53
PCDHB11Q9Y5F2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
PCDHB11Q9Y5F2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.46□□□□□ -1.53
PCDHB11Q9Y5F2 AC015813.6-201ENST00000624409 5808 ntBASIC5.46□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
PCDHB11Q9Y5F2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
PCDHB11Q9Y5F2 RN7SKP185-201ENST00000362813 326 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms