Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNA5SP399-201ENST00000364003 117 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RN7SKP280-201ENST00000364196 304 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNU6-335P-201ENST00000364563 113 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNU4-12P-201ENST00000365233 139 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNA5SP283-201ENST00000365604 119 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNU6-629P-201ENST00000384061 103 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RNU6-456P-201ENST00000384493 107 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 CALM2P3-201ENST00000400429 449 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 SSXP9-201ENST00000417503 292 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RPL17P36-201ENST00000420302 549 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 USP9YP18-201ENST00000425912 695 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL691449.1-201ENST00000426570 421 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC122718.1-201ENST00000439448 744 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 HMGN2P21-201ENST00000447764 270 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 HMGB3P8-201ENST00000449709 577 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 NANOGP10-201ENST00000453325 895 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 FAM133DP-201ENST00000464802 691 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RPS15AP36-201ENST00000492022 382 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC078817.1-201ENST00000492623 435 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC026801.2-201ENST00000515352 425 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 RPS3AP4-201ENST00000555161 764 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 SUB1P2-201ENST00000556401 297 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC106785.1-201ENST00000565935 262 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC092325.1-201ENST00000566449 554 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 MIR3186-201ENST00000577404 85 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 SNORD84-203ENST00000584275 78 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL136363.1-201ENST00000605349 337 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL357078.3-201ENST00000607528 618 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC243312.2-201ENST00000623340 601 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC112484.5-201ENST00000624189 228 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL136313.1-201ENST00000624804 202 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 AL008636.1-201ENST00000625038 1018 ntBASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
DTX4Q9Y2E6 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
DTX4Q9Y2E6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
DTX4Q9Y2E6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.71□□□□□ -1.81
DTX4Q9Y2E6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
DTX4Q9Y2E6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AL365440.1-201ENST00000436135 2167 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RNA5SP235-201ENST00000365411 114 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 Y_RNA.409-201ENST00000383990 98 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RNU2-43P-201ENST00000410306 190 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RNU4-65P-201ENST00000410473 140 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RN7SKP159-201ENST00000410657 292 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 UBE2FP1-201ENST00000416536 447 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AF228730.2-201ENST00000438784 848 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AL162151.2-201ENST00000448875 158 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC013267.1-201ENST00000458227 267 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AP000873.1-201ENST00000463987 400 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC078785.3-201ENST00000476607 425 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RPL31P61-201ENST00000496160 376 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC116353.2-201ENST00000505332 712 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AP004371.1-201ENST00000525240 214 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC011979.2-201ENST00000527568 352 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC125611.2-201ENST00000551907 647 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 BNIP3P5-201ENST00000562290 498 ntBASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
DTX4Q9Y2E6 AC010928.3-201ENST00000587712 541 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms