Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MAPK10-349ENST00000641767 3661 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MFSD8-216ENST00000641147 4009 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP90-201ENST00000364801 99 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RNU4-78P-201ENST00000410940 126 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC007738.1-201ENST00000413892 348 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RPL31P12-201ENST00000422587 358 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 EI24P4-201ENST00000423683 1078 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AL669831.1-202ENST00000428504 417 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 SNAP23P1-201ENST00000433229 246 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC104058.1-201ENST00000448028 297 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 OR1H1P-201ENST00000448731 937 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RPL7P42-201ENST00000481005 679 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC022133.1-201ENST00000490961 571 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AP001086.1-201ENST00000494882 321 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AP002812.1-201ENST00000495378 474 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP360-201ENST00000516555 118 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC063950.1-201ENST00000552036 308 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MIR3941-201ENST00000582572 103 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC067852.3-201ENST00000589177 561 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC106900.2-201ENST00000604994 317 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MIR4275-201ENST00000636486 87 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC100778.3-201ENST00000580060 1750 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 AC104118.1-201ENST00000607625 1589 ntBASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.19□□□□□ -1.74
CDC42EP3Q9UKI2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC022893.2-201ENST00000564832 3296 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 DDX18P3-201ENST00000404856 2007 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC126755.2-208ENST00000327792 462 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC138969.1-213ENST00000331436 462 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-1249P-201ENST00000363237 111 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 Y_RNA.133-201ENST00000363428 110 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-593P-201ENST00000364716 112 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-393P-201ENST00000384475 107 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-14P-201ENST00000384630 106 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNA5SP113-201ENST00000410486 84 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-712P-201ENST00000410558 100 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RPLP0P7-201ENST00000416050 667 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC104333.2-201ENST00000422630 192 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AL591704.1-201ENST00000432574 275 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC004866.2-201ENST00000438285 481 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 MTCO3P10-201ENST00000455912 772 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 TRBV1-201ENST00000476502 284 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 NIP7P2-201ENST00000485801 544 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU2-69P-201ENST00000516061 100 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 SNORA14.1-201ENST00000516113 141 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 RNU6-352P-201ENST00000516908 107 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC008694.2-201ENST00000517591 306 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC105031.1-201ENST00000518550 476 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 DYNLL1P4-201ENST00000549314 266 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 TVP23CP2-201ENST00000571473 623 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 MIR5692C1-201ENST00000585309 91 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AP000769.2-201ENST00000602344 396 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 XIAPP1-201ENST00000603162 600 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AL670379.4-201ENST00000605279 254 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AP000654.2-201ENST00000605633 586 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 U2.17-201ENST00000611454 95 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 AL672167.1-204ENST00000641875 3017 ntBASIC4.18□□□□□ -1.74
CDC42EP3Q9UKI2 MAPK10-304ENST00000641341 3984 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms