Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 RPL32P3-201ENST00000359025 275 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 RNU2-41P-201ENST00000410991 178 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 HSPE1P12-201ENST00000412576 301 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 RPL30P2-201ENST00000414021 291 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 MTND3P17-201ENST00000416968 344 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL589872.1-201ENST00000426602 288 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 USP12PX-201ENST00000432383 1057 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 RPL22P17-201ENST00000438729 315 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC083863.1-201ENST00000438811 231 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 HMGB1P37-201ENST00000439613 609 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 snoU13.4-201ENST00000458916 104 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 RPL23AP55-201ENST00000498163 452 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC021146.1-201ENST00000511202 716 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AP003730.1-201ENST00000524605 285 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC009643.1-201ENST00000532030 391 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 PARP1P2-201ENST00000556806 195 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.51□□□□□ -1.69
USP25Q9UHP3 RNU6-87P-201ENST00000607561 108 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC023043.4-201ENST00000612081 449 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL591424.2-201ENST00000617023 128 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 U7.8-201ENST00000619968 63 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 MIR6758-201ENST00000620653 63 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 AL360181.4-201ENST00000621752 134 ntBASIC4.51□□□□□ -1.69
USP25Q9UHP3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP25Q9UHP3 AC066616.2-201ENST00000559334 1481 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC009902.3-201ENST00000606235 2172 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP25Q9UHP3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 RNU6-534P-201ENST00000364877 106 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 RPL21P109-201ENST00000422213 475 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 RPL23AP38-201ENST00000423801 469 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC012498.1-201ENST00000424037 437 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 DUTP6-201ENST00000425573 462 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 ISCA1P6-201ENST00000427740 390 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 ELOCP14-201ENST00000428070 331 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 VDAC1P3-201ENST00000434069 851 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 ELOCP7-201ENST00000439968 331 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 MTND4LP16-201ENST00000440828 295 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 DPPA3P1-201ENST00000448050 469 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 ANP32BP2-201ENST00000454525 545 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 MTCYBP18-201ENST00000501056 747 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC098799.2-201ENST00000509466 868 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 RNU6-358P-201ENST00000516564 75 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AP003034.1-201ENST00000534621 422 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC091516.1-201ENST00000549191 703 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC136624.4-201ENST00000573044 370 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AP003122.6-201ENST00000623831 495 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC099654.5-201ENST00000636479 350 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 MIR1321-201ENST00000637766 79 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC011460.1-201ENST00000636268 1834 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 AC138915.3-201ENST00000562908 1389 ntBASIC4.5□□□□□ -1.69
USP25Q9UHP3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USP25Q9UHP3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.49□□□□□ -1.69
USP25Q9UHP3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
USP25Q9UHP3 AC092125.1-201ENST00000562568 1995 ntBASIC4.49□□□□□ -1.69
USP25Q9UHP3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.49□□□□□ -1.69
USP25Q9UHP3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.49□□□□□ -1.69
USP25Q9UHP3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USP25Q9UHP3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP25Q9UHP3 AC116096.1-201ENST00000566804 2314 ntBASIC4.49□□□□□ -1.69
USP25Q9UHP3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms