Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-790P-201ENST00000384479 105 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 OR2AT2P-201ENST00000413438 905 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 VTI1BP4-201ENST00000427516 527 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 KRT8P51-201ENST00000438938 274 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AL359273.1-201ENST00000510918 627 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-313P-201ENST00000516317 112 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 OR1F2P-201ENST00000570470 933 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AL160281.1-201ENST00000605307 311 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC005344.1-201ENST00000613391 459 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 U2.14-201ENST00000615943 113 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AC007998.5-201ENST00000622938 237 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AL356489.2-201ENST00000566968 3528 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 Z75746.1-201ENST00000440243 2080 ntBASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
CUEDC1Q9NWM3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AC005183.1-201ENST00000603687 1979 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.27-201ENST00000362540 103 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 SNORA64.1-201ENST00000362600 132 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-1249P-201ENST00000363237 111 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AL133270.1-201ENST00000402635 279 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.592-201ENST00000410274 109 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.625-201ENST00000411256 107 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AL030996.1-201ENST00000411430 235 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 BX842559.1-201ENST00000419615 532 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RPS17P5-201ENST00000498293 408 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AC008958.1-201ENST00000511047 682 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.662-201ENST00000516028 97 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 MIR4643-201ENST00000577473 78 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 MIR4300-201ENST00000581016 96 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 PRPF19P1-201ENST00000584766 898 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 FO393422.1-201ENST00000603908 708 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AL158032.1-201ENST00000605401 106 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 MIR7155-201ENST00000615925 56 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 MIR376A1-201ENST00000616574 68 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RN7SL544P-201ENST00000617232 284 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 RN7SL763P-201ENST00000620922 284 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 U6.106-201ENST00000636360 105 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 AL137141.1-201ENST00000624622 4836 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC02555-201ENST00000563933 1951 ntBASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.51□□□□□ -1.53
CUEDC1Q9NWM3 BCORP1-203ENST00000513194 5093 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 HSPA8P4-201ENST00000511877 1920 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 RNA5SP453-201ENST00000362503 119 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 Y_RNA.458-201ENST00000384240 102 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 RNU6-45P-201ENST00000384471 107 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC096921.1-201ENST00000411661 375 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AL031659.1-201ENST00000447075 539 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 SNORD108-201ENST00000459332 71 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 RN7SL570P-201ENST00000484405 292 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC087190.1-201ENST00000484462 480 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 NIP7P2-201ENST00000485801 544 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 AC107032.1-201ENST00000485945 480 ntBASIC5.5□□□□□ -1.53
CUEDC1Q9NWM3 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms