Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 IGHV3-76-201ENST00000522465 295 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 MIR4429-201ENST00000580105 73 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AF038458.1-201ENST00000588406 262 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC107214.2-201ENST00000608204 634 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AP003122.6-201ENST00000623831 495 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC079416.3-201ENST00000624479 549 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC017037.3-201ENST00000625016 472 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 AC006927.3-201ENST00000638789 384 ntBASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.7□□□□□ -1.82
BLOC1S4Q9NUP1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 SNORA14A-201ENST00000364773 135 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-741P-201ENST00000383889 107 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AL354719.1-201ENST00000406535 843 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 RPL17P12-201ENST00000413391 526 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC111000.2-201ENST00000507775 550 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 CASP1P1-201ENST00000526345 212 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AP000907.2-201ENST00000530827 353 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 ACTR3BP3-201ENST00000565577 979 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 MIR4307-201ENST00000582802 84 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 MIR4276-201ENST00000584832 70 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC013553.2-201ENST00000604244 589 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC007038.2-201ENST00000608095 740 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC010133.1-201ENST00000615809 842 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AL355493.4-201ENST00000618530 292 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 SNORD39.4-201ENST00000620099 78 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AP002791.1-201ENST00000623291 381 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 AC007671.2-201ENST00000637344 619 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BLOC1S4Q9NUP1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-500P-201ENST00000362349 107 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RNU6-278P-201ENST00000390945 109 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RPL21P40-201ENST00000428586 483 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC109583.1-201ENST00000432156 268 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 USP12PX-201ENST00000432383 1057 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RPL37P21-201ENST00000435890 276 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 LARP1BP3-201ENST00000437229 869 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 HMGB3P11-201ENST00000440127 604 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 ELOCP30-201ENST00000447108 299 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC108059.3-201ENST00000456388 214 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC008481.1-201ENST00000463278 396 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RPL21P8-201ENST00000465083 535 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AL133153.1-201ENST00000557756 303 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 HMGB1P6-201ENST00000569046 646 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MIR1254-2-201ENST00000579553 63 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC015917.1-201ENST00000579654 510 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 HSPE1P7-201ENST00000604681 321 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 uc_338.1-201ENST00000612113 180 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC004223.4-201ENST00000612426 332 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MIR7975-201ENST00000619350 68 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC112204.3-201ENST00000623822 332 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 AC007496.3-201ENST00000624987 3443 ntBASIC3.68□□□□□ -1.82
BLOC1S4Q9NUP1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms