Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC139713.2-214ENST00000642059 1811 ntBASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCM2LQ9NUG4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AL139276.1-201ENST00000311910 1001 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RPL7P26-201ENST00000333817 754 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU5A-1-201ENST00000362698 116 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU6-552P-201ENST00000362869 119 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU6-61P-201ENST00000365528 109 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU6-946P-201ENST00000383878 107 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU6-701P-201ENST00000384059 107 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 SNORA48.7-201ENST00000391302 135 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RN7SKP106-201ENST00000410832 272 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU6-193P-201ENST00000410977 107 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC098614.3-201ENST00000438957 440 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC020550.1-201ENST00000447385 163 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 snoU13.4-201ENST00000458916 104 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RPS20P20-201ENST00000460498 340 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 HSPE1P6-201ENST00000479457 291 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 EIF4EP3-201ENST00000498782 656 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC004062.1-201ENST00000509926 645 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC023141.12-201ENST00000512399 199 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 RNU4-29P-201ENST00000515943 174 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC103843.2-201ENST00000530523 682 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 SNRPGP16-201ENST00000533275 226 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 BNIP3P9-201ENST00000603714 553 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC079684.1-201ENST00000621405 437 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC007998.5-201ENST00000622938 237 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AC112200.1-201ENST00000625015 234 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 API5P2-201ENST00000397055 1498 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 AL442639.1-201ENST00000625030 1899 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 OR4G1P-203ENST00000641984 1631 ntBASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCM2LQ9NUG4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 RNA5SP388-201ENST00000362584 119 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 Y_RNA.72-201ENST00000362894 103 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 SNORA36C-201ENST00000384289 132 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AL591848.1-201ENST00000413092 322 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 OR6C66P-201ENST00000414917 930 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 CALM2P2-201ENST00000428512 440 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC133473.1-201ENST00000455173 299 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 RPL23AP31-201ENST00000456160 467 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC106872.2-201ENST00000494303 480 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC139783.2-201ENST00000504847 1145 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 PARP4P3-201ENST00000510265 317 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC008549.1-201ENST00000512900 643 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 RNU6-352P-201ENST00000516908 107 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 SUB1P1-201ENST00000524415 382 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AL355836.1-201ENST00000555951 870 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 FAM27B-201ENST00000610601 213 ntBASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCM2LQ9NUG4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms