Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 RPL38P4-201ENST00000502376 214 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 OR5BM1P-201ENST00000512021 366 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 AC074051.3-201ENST00000570238 358 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 VN1R88P-201ENST00000596787 292 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 SNRPGP19-201ENST00000603826 189 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 BX322635.1-201ENST00000605804 496 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AC092954.1-201ENST00000609121 445 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AP001521.1-201ENST00000609150 300 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 AC006329.2-201ENST00000611491 394 ntBASIC2.12□□□□□ -2.07
CISHQ9NSE2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CISHQ9NSE2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 SNORA67.1-201ENST00000364749 141 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 RNA5SP88-201ENST00000365560 109 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 MIR649-201ENST00000384843 97 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 RN7SL429P-201ENST00000479090 223 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 RN7SL489P-201ENST00000486185 223 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 RN7SL327P-201ENST00000488659 223 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC091917.2-201ENST00000505002 744 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC104108.1-201ENST00000509930 412 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC087808.1-201ENST00000520501 361 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC010546.1-201ENST00000569391 485 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 MIR3945-201ENST00000581853 98 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 OR1M4P-201ENST00000589199 287 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AL136363.1-201ENST00000605349 337 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 RN7SL853P-201ENST00000617250 223 ntBASIC2.11□□□□□ -2.07
CISHQ9NSE2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.11□□□□□ -2.07
CISHQ9NSE2 AC007342.9-201ENST00000623877 1385 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNU6-921P-201ENST00000384361 107 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNU6-443P-201ENST00000384780 107 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNU4-26P-201ENST00000410270 107 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 PAICSP7-201ENST00000419829 962 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 NDUFB4P6-201ENST00000436819 366 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 RPS15AP7-201ENST00000439294 405 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RNF2P1-201ENST00000442955 1010 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC009296.1-201ENST00000443146 155 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AL031659.1-201ENST00000447075 539 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC009961.3-201ENST00000449832 765 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 NAP1L1P3-201ENST00000462291 880 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 VPS26AP1-201ENST00000483197 979 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RPS15AP34-201ENST00000487776 387 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 MTAPP1-201ENST00000489154 819 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 OR52A4P-203ENST00000498233 1014 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC092436.1-201ENST00000506450 503 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 HMGB3P3-201ENST00000510526 400 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AP000790.1-201ENST00000528891 737 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC004217.3-201ENST00000551552 878 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CISHQ9NSE2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC135628.1-201ENST00000568867 534 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 MIR3609-201ENST00000582661 80 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC021851.1-201ENST00000608537 1082 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC110994.2-201ENST00000635481 492 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CISHQ9NSE2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CISHQ9NSE2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.1□□□□□ -2.07
CISHQ9NSE2 AC025263.3-201ENST00000622965 1396 ntBASIC2.1□□□□□ -2.07
CISHQ9NSE2 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CISHQ9NSE2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.09□□□□□ -2.07
CISHQ9NSE2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.09□□□□□ -2.07
CISHQ9NSE2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CISHQ9NSE2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
CISHQ9NSE2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.09□□□□□ -2.07
CISHQ9NSE2 SNORD115-48-201ENST00000364764 76 ntBASIC2.09□□□□□ -2.07
CISHQ9NSE2 AL513475.1-201ENST00000406602 315 ntBASIC2.09□□□□□ -2.07
CISHQ9NSE2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.09□□□□□ -2.07
CISHQ9NSE2 RNU6-193P-201ENST00000410977 107 ntBASIC2.09□□□□□ -2.07
CISHQ9NSE2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms