Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC006270.3-201ENST00000605967 1036 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC080013.3-201ENST00000606839 578 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AL357080.1-201ENST00000617394 239 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AL445264.1-201ENST00000621719 171 ntBASIC3.16□□□□□ -1.9
HPS4Q9NQG7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.16□□□□□ -1.9
HPS4Q9NQG7 AC233263.6-201ENST00000631132 1963 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 RPL32P35-201ENST00000415214 394 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 ELOCP9-201ENST00000418624 239 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AL953862.1-201ENST00000423016 168 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 MTCO2P20-201ENST00000437339 673 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC108729.1-201ENST00000487812 947 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 NBEAP1-201ENST00000554452 979 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 COX6CP3-201ENST00000580869 223 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC106900.2-201ENST00000604994 317 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC009570.1-201ENST00000609599 745 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AL355816.2-201ENST00000610049 647 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC245297.2-201ENST00000610119 565 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC007998.5-201ENST00000622938 237 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC099654.7-201ENST00000635788 2127 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 AC005539.1-201ENST00000443768 1479 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 TAB3P1-202ENST00000452645 1634 ntBASIC3.15□□□□□ -1.91
HPS4Q9NQG7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HPS4Q9NQG7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AP000776.1-201ENST00000530032 1663 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 OR5J1P-201ENST00000313544 939 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RPL7P25-201ENST00000404151 721 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 SSR1P2-201ENST00000415208 787 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RPS25P9-201ENST00000435591 252 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC004924.1-201ENST00000480160 781 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 FAM172BP-201ENST00000487497 1089 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC010587.2-201ENST00000511727 448 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC017037.2-201ENST00000513850 890 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC091057.2-201ENST00000602594 792 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RPL12P50-201ENST00000603116 116 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC034229.4-201ENST00000607861 441 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC013470.4-201ENST00000619978 986 ntBASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HPS4Q9NQG7 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 U3.6-201ENST00000363622 211 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 RNA5SP139-201ENST00000364340 117 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 USP9YP33-201ENST00000412220 421 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 USP9YP35-201ENST00000435696 412 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 Z80107.1-201ENST00000436830 412 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 MTND5P14-201ENST00000441481 1267 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AL135938.1-201ENST00000443141 297 ntBASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.13□□□□□ -1.91
HPS4Q9NQG7 AC002381.1-201ENST00000447049 280 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms