Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC006445.2-201ENST00000510061 472 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC010625.1-201ENST00000511296 403 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC017037.2-201ENST00000513850 890 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 HPRT1P3-201ENST00000539521 576 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 HIGD1AP17-201ENST00000554576 276 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC090695.1-201ENST00000561269 1222 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AL132657.2-201ENST00000564417 358 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 GLUD1P4-201ENST00000590914 418 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 AC026790.2-201ENST00000606282 430 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 MIR1322-201ENST00000638013 71 ntBASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RPAP3Q9H6T3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RNU1-109P-201ENST00000383960 147 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 DHFRP6-201ENST00000401776 268 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC068533.2-201ENST00000411872 306 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RPL23AP74-201ENST00000437246 471 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 MLLT10P2-201ENST00000506434 249 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 HMGB1P28-201ENST00000507778 552 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RN7SKP43-201ENST00000516173 320 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 MTND3P19-201ENST00000603825 345 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC069304.2-201ENST00000605154 435 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AL139022.2-201ENST00000606934 443 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AL157392.4-201ENST00000609756 345 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AL391834.2-201ENST00000609982 546 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AL353748.2-201ENST00000622148 471 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 AC243829.7-201ENST00000633081 225 ntBASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP3Q9H6T3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 CYCSP45-201ENST00000402289 315 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 BX682237.1-201ENST00000415016 335 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 RPL32P28-201ENST00000443577 397 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 TRGVB-201ENST00000453257 471 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 OFD1P3Y-201ENST00000453312 783 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 RPL23AP31-201ENST00000456160 467 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC023424.2-201ENST00000493479 777 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 CBX3P3-201ENST00000508108 532 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC098799.2-201ENST00000509466 868 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC010486.1-201ENST00000511793 424 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 RNY4P37-201ENST00000516225 96 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 SLC2A13P1-201ENST00000531560 322 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC234778.2-201ENST00000566241 354 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 FAM60BP-201ENST00000578364 658 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 MIR3945-201ENST00000581853 98 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 MIR4637-201ENST00000582405 84 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC099654.9-201ENST00000637055 678 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 AC092447.7-201ENST00000422212 1621 ntBASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.18□□□□□ -1.9
RPAP3Q9H6T3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AL356057.3-201ENST00000402607 340 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AL590084.1-201ENST00000407885 387 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AL137014.1-201ENST00000420490 1226 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 RPL7P30-201ENST00000420888 709 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 MTND2P5-201ENST00000432656 1006 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 HSFY7P-201ENST00000432672 318 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 HSFY8P-201ENST00000437934 318 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 LSM1P1-201ENST00000438629 273 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AL513043.1-201ENST00000439124 535 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 MTND2P20-201ENST00000440805 661 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 OR10R1P-201ENST00000441524 1141 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 HSFY5P-201ENST00000453726 309 ntBASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP3Q9H6T3 AC093278.1-201ENST00000494700 600 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms