Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP001804.3-201ENST00000525146 880 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC090616.3-201ENST00000582184 217 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 CBX3P2-202ENST00000583365 535 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC061975.8-201ENST00000587058 721 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AL356280.1-201ENST00000603614 379 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 HSPE1P7-201ENST00000604681 321 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 AC004775.1-201ENST00000607389 753 ntBASIC2.32□□□□□ -2.04
TRIM4Q9C037 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.32□□□□□ -2.04
TRIM4Q9C037 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM4Q9C037 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL079342.1-201ENST00000401460 267 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 RNU6-712P-201ENST00000410558 100 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL158825.1-201ENST00000414735 521 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL356320.1-201ENST00000429616 163 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC096638.1-201ENST00000444678 216 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC092685.1-201ENST00000447960 1243 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL139109.1-201ENST00000455491 297 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 KLRA1P-201ENST00000503499 986 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM4Q9C037 RPS3AP23-202ENST00000574601 686 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.31□□□□□ -2.04
TRIM4Q9C037 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 LINC00216-201ENST00000623548 1126 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 MTND2P41-201ENST00000637599 773 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 ADAM3A-203ENST00000461344 2157 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 KPNA2P1-201ENST00000458289 1591 ntBASIC2.31□□□□□ -2.04
TRIM4Q9C037 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 HMGB1P5-201ENST00000255320 642 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 RNU6-1074P-201ENST00000383995 104 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 MIR493-201ENST00000385254 89 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 ATP5F1P1-201ENST00000433775 569 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC098826.1-201ENST00000433943 471 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 SNRPGP6-201ENST00000451124 220 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AL359385.1-201ENST00000456509 365 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 RPL36AP51-201ENST00000487216 318 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 MLLT10P2-201ENST00000506434 249 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 CBX3P3-201ENST00000508108 532 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 RNU6-488P-201ENST00000515918 99 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 RNA5SP281-201ENST00000516504 135 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC002984.1-201ENST00000591692 448 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AL355812.1-201ENST00000603215 216 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 AP000942.3-201ENST00000603702 160 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 AL109659.3-201ENST00000624985 950 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 AC110079.1-202ENST00000635213 138 ntBASIC2.3□□□□□ -2.04
TRIM4Q9C037 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM4Q9C037 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM4Q9C037 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AL356292.1-201ENST00000283110 373 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM4Q9C037 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 RNU6-272P-201ENST00000411028 104 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AL592045.1-201ENST00000429867 352 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC010881.1-201ENST00000433830 235 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 UBE2FP3-201ENST00000436366 524 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 RAB11AP1-201ENST00000442978 646 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM4Q9C037 AC015724.1-201ENST00000478577 156 ntBASIC2.29□□□□□ -2.04
TRIM4Q9C037 AL135752.1-201ENST00000479477 471 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms