Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC004223.4-201ENST00000612426 332 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AL592295.2-201ENST00000612578 206 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 PCMTD1P7-201ENST00000634506 357 ntBASIC3.31□□□□□ -1.88
CDCA3Q99618 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
CDCA3Q99618 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CDCA3Q99618 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDCA3Q99618 RNU6-744P-201ENST00000365557 107 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 RNU6-1316P-201ENST00000384242 108 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.3□□□□□ -1.88
CDCA3Q99618 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 HMGB1P11-201ENST00000413899 637 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 RPL21P112-201ENST00000434403 463 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AC016696.1-201ENST00000446949 318 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 Z82190.1-201ENST00000454534 490 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 RPL30P9-201ENST00000465586 330 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AC010285.1-201ENST00000470580 392 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AC104563.1-201ENST00000476147 376 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDCA3Q99618 HMGB1P22-201ENST00000505315 124 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC091826.1-201ENST00000514065 313 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 RNA5SP367-201ENST00000516557 118 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 CR383656.7-201ENST00000548164 174 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC135628.1-201ENST00000568867 534 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AL353997.4-201ENST00000586196 166 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.3□□□□□ -1.88
CDCA3Q99618 DUXAP11-201ENST00000603858 526 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AL031176.1-201ENST00000604554 466 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AL356585.4-201ENST00000623078 1229 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 AF246928.1-201ENST00000623768 87 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDCA3Q99618 AC073073.2-201ENST00000609827 2578 ntBASIC3.3□□□□□ -1.88
CDCA3Q99618 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
CDCA3Q99618 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDCA3Q99618 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CDCA3Q99618 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CDCA3Q99618 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDCA3Q99618 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC233263.6-201ENST00000631132 1963 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDCA3Q99618 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AL672167.1-206ENST00000356293 943 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 RNU6-553P-201ENST00000364047 96 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 Y_RNA.234-201ENST00000364409 97 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 SNORD116-8-201ENST00000384365 95 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 Y_RNA.548-201ENST00000384656 105 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 RPS3AP26-201ENST00000398259 784 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 MTCO3P12-201ENST00000416718 547 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 CST9LP2-201ENST00000437612 320 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 Z99127.3-201ENST00000448158 395 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.29□□□□□ -1.88
CDCA3Q99618 RPS4XP13-201ENST00000483219 789 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC111000.2-201ENST00000507775 550 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 TXNP6-201ENST00000510190 310 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC005921.1-201ENST00000510589 286 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 RNU6-1095P-201ENST00000516148 108 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 RNU6-714P-201ENST00000516963 103 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC103783.1-201ENST00000520506 373 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AC109635.4-202ENST00000531666 412 ntBASIC3.29□□□□□ -1.88
CDCA3Q99618 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.29□□□□□ -1.88
CDCA3Q99618 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.29□□□□□ -1.88
CDCA3Q99618 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms