Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RPS23P4-201ENST00000487908 423 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CFAP54Q96N23 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.45□□□□□ -2.18
CFAP54Q96N23 HMGN1P28-201ENST00000521340 364 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 AL138955.1-201ENST00000622881 1040 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 SNORA50A-202ENST00000629536 136 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 SGO1P2-201ENST00000429458 1589 ntBASIC1.45□□□□□ -2.18
CFAP54Q96N23 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
CFAP54Q96N23 MTND1P23-201ENST00000416931 372 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 AL445669.1-201ENST00000426743 755 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 AC079203.1-201ENST00000487972 404 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CFAP54Q96N23 MIR222-201ENST00000384992 110 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 ARL2BPP4-201ENST00000506854 471 ntBASIC1.44□□□□□ -2.18
CFAP54Q96N23 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.44□□□□□ -2.18
CFAP54Q96N23 METTL21EP-201ENST00000298105 713 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CFAP54Q96N23 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC010487.4-201ENST00000637027 61 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 RPL31P35-201ENST00000431058 377 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 RPS26P24-201ENST00000497656 331 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 PRELID2P1-201ENST00000552837 301 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC007229.1-201ENST00000590455 412 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.43□□□□□ -2.18
CFAP54Q96N23 AL158801.5-201ENST00000623123 465 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 AL121594.5-201ENST00000631724 573 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
CFAP54Q96N23 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 CYCSP48-201ENST00000417124 323 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC008837.2-201ENST00000513076 418 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 SNORA31.11-201ENST00000516528 139 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC023813.2-201ENST00000564321 469 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 HMGN2P35-201ENST00000412164 270 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC090774.1-201ENST00000435925 246 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 RPS29P20-201ENST00000489592 171 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AC084851.1-201ENST00000529105 249 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.42□□□□□ -2.18
CFAP54Q96N23 AP003499.2-201ENST00000624100 483 ntBASIC1.42□□□□□ -2.18
CFAP54Q96N23 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 RNU1-133P-201ENST00000364867 167 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 MCTS2P-201ENST00000394552 546 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 VN1R96P-201ENST00000446052 858 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 RPL23AP62-201ENST00000463396 453 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 MTCYBP18-201ENST00000501056 747 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 RNA5SP330-201ENST00000517096 96 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 DUXAP5-201ENST00000529668 529 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC090525.3-201ENST00000605601 189 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC097468.3-201ENST00000607956 456 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC067852.7-201ENST00000623270 535 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 RNU6-716P-201ENST00000365621 103 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 RN7SKP200-201ENST00000410564 320 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AL358176.2-201ENST00000425769 204 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 BMI1P1-201ENST00000445879 941 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 SUMO2P4-201ENST00000504193 276 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 MTND5P21-201ENST00000531961 522 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.41□□□□□ -2.18
CFAP54Q96N23 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CFAP54Q96N23 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CFAP54Q96N23 AC019155.1-201ENST00000382242 574 ntBASIC1.41□□□□□ -2.18
CFAP54Q96N23 HMGN1P14-201ENST00000412459 517 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms