Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC008628.2-201ENST00000502605 298 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC025554.1-201ENST00000505641 188 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC116562.3-201ENST00000506136 177 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 SNORA31.9-201ENST00000516429 84 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 SNORD60.2-201ENST00000516883 86 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC068587.5-201ENST00000528506 175 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 OR5BN1P-201ENST00000532955 829 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC010591.1-201ENST00000603941 649 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC010680.3-201ENST00000604215 520 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 BNIP3P10-201ENST00000605360 577 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 TUG1_2.1-201ENST00000614234 87 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC068724.3-201ENST00000625906 87 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC138649.5-201ENST00000637456 137 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 MTND5P17-201ENST00000418405 1603 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AL136964.1-201ENST00000622038 2990 ntBASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.83□□□□□ -1.8
CTHRC1Q96CG8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 MARK2P15-201ENST00000432204 2186 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 NACAP2-201ENST00000318548 624 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 CBX3P1-201ENST00000325243 554 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 SNORA60-201ENST00000362396 134 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.22-201ENST00000362492 102 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 U3.15-201ENST00000365398 212 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 Y_RNA.367-201ENST00000365544 101 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RNU5E-6P-201ENST00000365574 115 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 MIR3074-201ENST00000384885 81 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL356967.1-201ENST00000406305 431 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RNU2-43P-201ENST00000410306 190 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 OR9R1P-201ENST00000412200 877 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL513185.2-201ENST00000425543 193 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RPS6P12-201ENST00000432491 726 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC004866.2-201ENST00000438285 481 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL162389.1-201ENST00000449233 177 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RNU7-182P-201ENST00000459009 62 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 SNORD108-201ENST00000459332 71 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RPS20P20-201ENST00000460498 340 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL163973.1-201ENST00000484753 577 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC114781.4-201ENST00000513707 639 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 SNORD27.1-201ENST00000516319 72 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 CENPUP1-201ENST00000526649 1202 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 ARL2BPP2-201ENST00000550907 489 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 NCAPGP2-201ENST00000557911 754 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 RPL23AP87-202ENST00000573039 466 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 BNIP3P9-201ENST00000603714 553 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AL121992.2-201ENST00000606262 256 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC069234.5-201ENST00000611056 416 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 SNHG22-203ENST00000617833 660 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC079684.1-201ENST00000621405 437 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC024614.3-201ENST00000637860 256 ntBASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CTHRC1Q96CG8 AC006020.1-201ENST00000420179 1854 ntBASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.81□□□□□ -1.8
CTHRC1Q96CG8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms