Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 MIR3158-1-201ENST00000583596 81 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 AC093227.2-201ENST00000589357 285 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 AC244505.7-201ENST00000599675 272 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 MIR92B-201ENST00000607575 96 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 CR392039.5-201ENST00000623201 510 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 MIR4275-201ENST00000636486 87 ntBASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHMP4CQ96CF2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC005832.2-201ENST00000538921 1430 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 CEP170P1-201ENST00000502249 4587 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RNA5SP322-201ENST00000363617 119 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RNY1P12-201ENST00000364251 105 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 Y_RNA.296-201ENST00000364930 108 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 MIR607-201ENST00000385241 96 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 HMGN2P8-201ENST00000391458 268 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RN7SKP156-201ENST00000410308 342 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 ELOCP4-201ENST00000420090 333 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RPL31P35-201ENST00000431058 377 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC104850.1-201ENST00000435940 476 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 SNRPGP5-201ENST00000456003 220 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 snoU13.4-201ENST00000458916 104 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 KCTD9P5-201ENST00000504141 1170 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 BTF3L4P4-201ENST00000506381 449 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RPL37P25-201ENST00000507308 276 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 RN7SKP209-201ENST00000516888 304 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC087369.1-201ENST00000520775 996 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 YPEL5P3-201ENST00000547227 352 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC006270.2-201ENST00000578523 652 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 MIR98-201ENST00000606724 119 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC006338.1-201ENST00000618453 749 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AL360181.4-201ENST00000621752 134 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC138649.3-201ENST00000622154 254 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 AC244205.2-202ENST00000635781 342 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 MTND5P26-201ENST00000426018 1752 ntBASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CHMP4CQ96CF2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 MTND4P5-201ENST00000435821 1374 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 SNORA51.2-201ENST00000364595 132 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 PIGFP2-201ENST00000421400 651 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 RPL21P66-201ENST00000426566 466 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AL358934.1-201ENST00000432346 324 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC007537.2-201ENST00000472093 511 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 RPS15AP36-201ENST00000492022 382 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC107401.1-201ENST00000503426 685 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 SCARNA14-201ENST00000516903 136 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 TRMT10BP1-201ENST00000519377 943 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AP004242.1-201ENST00000533701 349 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 CCNG2P1-201ENST00000549521 1000 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC090877.1-201ENST00000561418 344 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC039056.2-201ENST00000622261 511 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC068880.5-201ENST00000624331 290 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 AC099654.12-201ENST00000639868 649 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 TAB3P1-202ENST00000452645 1634 ntBASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.56□□□□□ -1.68
CHMP4CQ96CF2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.55□□□□□ -1.68
CHMP4CQ96CF2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms