Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC007656.2-201ENST00000624902 4547 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 VPS26BP1-201ENST00000417155 755 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 SYF2P2-201ENST00000417620 583 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL593851.1-201ENST00000426171 157 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL512649.1-201ENST00000428997 581 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 RPL37P21-201ENST00000435890 276 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 MRPS31P2-201ENST00000451581 518 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC010099.1-201ENST00000455434 375 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC104619.4-201ENST00000510773 249 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 RNU6-1129P-201ENST00000515964 104 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 PCMTD1P2-201ENST00000565017 355 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 MIR4425-201ENST00000580572 84 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL606834.2-201ENST00000602954 668 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL133393.1-201ENST00000603277 287 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 OR10AB1P-201ENST00000609613 938 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 MIR7851-201ENST00000610611 160 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AL355493.4-201ENST00000618530 292 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC012150.2-201ENST00000621300 544 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 AP002791.1-201ENST00000623291 381 ntBASIC3.75□□□□□ -1.81
SKA1Q96BD8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SKA1Q96BD8 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SKA1Q96BD8 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC073346.2-201ENST00000624724 2058 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 RNU5A-2P-201ENST00000384337 116 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 SNORA48.8-201ENST00000391324 134 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 RPL17P50-201ENST00000396131 546 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 Z85995.1-201ENST00000415547 335 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AL451054.2-201ENST00000420896 202 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC011233.1-201ENST00000422812 283 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 MTND4P20-201ENST00000424125 869 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 MTND5P25-201ENST00000430499 799 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 Z82210.1-201ENST00000440037 231 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 PRDX3P3-201ENST00000447765 522 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC108059.3-201ENST00000456388 214 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 RPS20P22-201ENST00000473700 357 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 RNA5SP208-201ENST00000516156 78 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 SCARNA14-201ENST00000516903 136 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 SNORA70.24-201ENST00000517233 118 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 TRAV28-201ENST00000557548 323 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AMZ2P1-203ENST00000565833 850 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 KLKP1-201ENST00000595979 403 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC010591.1-201ENST00000603941 649 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 ELOCP35-201ENST00000604289 336 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 SNORA50A-202ENST00000629536 136 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC006927.3-201ENST00000638789 384 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 CR383658.2-201ENST00000547576 1525 ntBASIC3.74□□□□□ -1.81
SKA1Q96BD8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA1Q96BD8 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 RNU6-799P-201ENST00000363567 107 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SKA1Q96BD8 RNU6-1035P-201ENST00000384477 107 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 RN7SKP285-201ENST00000410137 318 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC012498.1-201ENST00000424037 437 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC109583.1-201ENST00000432156 268 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 RN7SL293P-201ENST00000481765 281 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC021146.5-201ENST00000503544 545 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC116347.2-201ENST00000514912 523 ntBASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA1Q96BD8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms