Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AC026412.2-201ENST00000512270 1075 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPRUQ92729 BNIP3P39-201ENST00000601077 554 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 RPP40P2-201ENST00000603596 712 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC092953.2-201ENST00000608000 699 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AL157392.4-201ENST00000609756 345 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AL158163.2-201ENST00000619110 700 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PTPRUQ92729 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPRUQ92729 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPRUQ92729 RNU6-216P-201ENST00000363282 104 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 SNORA51.2-201ENST00000364595 132 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPRUQ92729 RNU6-413P-201ENST00000384115 107 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 RNU6-253P-201ENST00000384730 105 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 MIR506-201ENST00000384998 124 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 RNU6-821P-201ENST00000390995 107 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 SNRPEP2-201ENST00000397592 279 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC106883.1-201ENST00000418805 562 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 FNDC3CP-201ENST00000420795 1155 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC092427.1-201ENST00000439177 601 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 DUXAP8-207ENST00000456786 622 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 snoU13.3-201ENST00000459441 104 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 TRBV1-201ENST00000476502 284 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 MTCYBP16-201ENST00000509187 1129 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPRUQ92729 RNA5SP458-201ENST00000516188 119 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC109635.4-202ENST00000531666 412 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 MTCO2P2-201ENST00000591258 225 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 AC091057.3-201ENST00000602684 733 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AP001521.1-201ENST00000609150 300 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 DUXAP10-204ENST00000612052 616 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 AC048347.1-201ENST00000624621 427 ntBASIC3.36□□□□□ -1.87
PTPRUQ92729 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRUQ92729 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 CDR1-202ENST00000625883 1485 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRUQ92729 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTPRUQ92729 SNORA7.2-201ENST00000364446 145 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 RNU6-335P-201ENST00000364563 113 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 Y_RNA.472-201ENST00000384322 102 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 SNORA40.2-201ENST00000390847 128 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRUQ92729 RN7SKP140-201ENST00000411196 284 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 MTATP6P20-201ENST00000414147 562 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AL161449.1-201ENST00000414531 1199 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPRUQ92729 RPL21P66-201ENST00000426566 466 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 MTND5P27-201ENST00000428871 1720 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTPRUQ92729 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPRUQ92729 RPL23AP74-201ENST00000437246 471 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRUQ92729 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 RN7SL297P-201ENST00000483161 293 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 TRAV31-201ENST00000502780 342 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC113420.1-201ENST00000507903 571 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC006390.1-201ENST00000508068 283 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 RNU6-1225P-201ENST00000516336 65 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 RNA5SP309-201ENST00000516670 106 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC091564.4-201ENST00000533934 2194 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRUQ92729 AADACP1-206ENST00000561502 1193 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AL132657.2-201ENST00000564417 358 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 BNIP3P24-201ENST00000593398 557 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 VN1R83P-201ENST00000595685 445 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 AC016877.3-201ENST00000606778 504 ntBASIC3.35□□□□□ -1.87
PTPRUQ92729 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPRUQ92729 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTPRUQ92729 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTPRUQ92729 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTPRUQ92729 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PTPRUQ92729 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTPRUQ92729 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTPRUQ92729 Y_RNA.4-201ENST00000362333 112 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 RNA5SP258-201ENST00000362750 119 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 RNU6-560P-201ENST00000364007 108 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 RNU6-657P-201ENST00000383904 107 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 RNU6-629P-201ENST00000384061 103 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 RNU6-584P-201ENST00000410350 95 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 LUZP4P1-201ENST00000415420 344 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 MTCO3P12-201ENST00000416718 547 ntBASIC3.34□□□□□ -1.88
PTPRUQ92729 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRUQ92729 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.34□□□□□ -1.88
PTPRUQ92729 Z98742.2-201ENST00000431564 187 ntBASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms