Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL355493.4-201ENST00000618530 292 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC017037.3-201ENST00000625016 472 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 AC099063.3-201ENST00000642066 185 ntBASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CKAP2Q8WWK9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 FAT1P1-201ENST00000406588 507 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 RPL27AP8-201ENST00000424277 446 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL390023.1-201ENST00000428836 262 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC073387.1-201ENST00000453261 709 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MTND1P9-201ENST00000453775 944 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL359385.1-201ENST00000456509 365 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC072039.1-201ENST00000477611 581 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 HSPE1P6-201ENST00000479457 291 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 LINC00888-204ENST00000487386 421 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL049874.1-201ENST00000489560 388 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MTCYBP35-201ENST00000503630 1137 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC022447.3-201ENST00000506865 495 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MTND4LP22-201ENST00000508209 276 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC104619.4-201ENST00000510773 249 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC087276.1-201ENST00000529659 480 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AP004247.1-201ENST00000531556 1289 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 ISCA1P3-201ENST00000577104 373 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MIR3921-201ENST00000577308 85 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 UBE2L4-201ENST00000587688 464 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC026790.2-201ENST00000606282 430 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AP000254.1-201ENST00000609934 520 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL603758.1-201ENST00000618654 241 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MIR6075-201ENST00000620782 95 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC009268.2-201ENST00000621925 457 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL158801.5-201ENST00000623123 465 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AP002791.1-201ENST00000623291 381 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC079597.1-201ENST00000624306 508 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC007671.2-201ENST00000637344 619 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 AC244258.1-201ENST00000637553 1071 ntBASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CKAP2Q8WWK9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CKAP2Q8WWK9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CKAP2Q8WWK9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CKAP2Q8WWK9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 RNU6-660P-201ENST00000364566 109 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 RNA5SP171-201ENST00000391071 115 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 SAR1AP2-201ENST00000392696 594 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 MIR1305-201ENST00000408300 86 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 RAP1BP1-201ENST00000412709 553 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 HSPE1P1-201ENST00000421494 318 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC091286.1-201ENST00000431233 461 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 FAM103A2P-201ENST00000444122 354 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC140076.1-201ENST00000449897 361 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 OR6K1P-201ENST00000456766 971 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC025518.1-201ENST00000479856 347 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC103843.2-201ENST00000530523 682 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 SETP2-201ENST00000553886 926 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 OR4T1P-201ENST00000554933 911 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 MIR4444-1-201ENST00000581696 74 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 MIR4444-2-201ENST00000584390 74 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AC106791.2-201ENST00000604680 391 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 AL159972.1-201ENST00000625150 448 ntBASIC3.15□□□□□ -1.91
CKAP2Q8WWK9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms