Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 VPS26AP1-201ENST00000483197 979 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 MTCO1P40-201ENST00000574371 625 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC090666.1-201ENST00000578241 445 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 MIR4769-201ENST00000584126 77 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 SNORD39.3-201ENST00000584451 71 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 GLUD1P4-201ENST00000590914 418 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC060766.3-201ENST00000591442 263 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC020895.1-201ENST00000595362 272 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AP002906.1-201ENST00000603405 233 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 MIR6132-201ENST00000622083 109 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AC106730.3-201ENST00000624568 641 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 AL121594.5-201ENST00000631724 573 ntBASIC2.17□□□□□ -2.06
LMX1AQ8TE12 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
LMX1AQ8TE12 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC092881.1-201ENST00000638218 2733 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 RNU5D-1-201ENST00000363299 116 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 U8.8-201ENST00000365399 135 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 DEFA7P-201ENST00000382676 285 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AP002784.2-201ENST00000397300 549 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AL121978.1-201ENST00000402778 359 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 HMGN2P3-201ENST00000433603 273 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 HMGN2P5-201ENST00000436882 273 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 LSM1P1-201ENST00000438629 273 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AL158053.1-201ENST00000441503 453 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 OR51B8P-201ENST00000449892 769 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 snoU13.23-201ENST00000458863 104 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 RNU7-140P-201ENST00000459546 60 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 NAP1L1P3-201ENST00000462291 880 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC008379.1-201ENST00000463655 464 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC015908.1-201ENST00000478739 476 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 SEM1P1-201ENST00000506694 209 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 OR10V3P-201ENST00000525712 725 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AP000867.2-201ENST00000532468 320 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC079148.1-201ENST00000565944 819 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 CYP3A51P-201ENST00000633513 256 ntBASIC2.16□□□□□ -2.06
LMX1AQ8TE12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LMX1AQ8TE12 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
LMX1AQ8TE12 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.15□□□□□ -2.06
LMX1AQ8TE12 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.15□□□□□ -2.06
LMX1AQ8TE12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.15□□□□□ -2.06
LMX1AQ8TE12 AC011460.1-201ENST00000636268 1834 ntBASIC2.15□□□□□ -2.06
LMX1AQ8TE12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 RNU6-353P-201ENST00000364266 108 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 OR5H15-201ENST00000383696 930 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 RNU6-549P-201ENST00000384433 107 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 SNORD116-23-201ENST00000384645 92 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 PTGES3P2-201ENST00000407942 482 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 RNU2-25P-201ENST00000411041 191 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 BX682237.1-201ENST00000415016 335 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC003685.2-201ENST00000422795 395 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 MTCO3P11-201ENST00000455103 774 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AL031183.1-201ENST00000457667 207 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 PABPC1P3-201ENST00000469174 459 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC011352.3-201ENST00000505162 593 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC118282.2-201ENST00000508739 374 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC011611.5-201ENST00000552477 578 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 MIR4666A-201ENST00000580160 79 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AL160237.3-201ENST00000604114 1013 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AP001330.4-201ENST00000604350 154 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC006329.2-201ENST00000611491 394 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AL353748.2-201ENST00000622148 471 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AC073592.7-201ENST00000623659 507 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms