Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 AC073346.2-201ENST00000624724 2058 ntBASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.11□□□□□ -1.59
LINC00116Q8NCU8 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 Y_RNA.100-201ENST00000363141 102 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 RNA5SP399-201ENST00000364003 117 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 RNU4-66P-201ENST00000365199 138 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 RNU6-1160P-201ENST00000384546 104 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 SNORD96B-201ENST00000386148 79 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 SSXP10-201ENST00000402595 565 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 MTND5P28-201ENST00000438005 1594 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 PPIAP15-201ENST00000479662 484 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 UBE2CP3-201ENST00000502715 450 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 RNU6-559P-201ENST00000516151 98 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 OR4P1P-201ENST00000530808 1136 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 OR5B10P-201ENST00000532869 642 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 ELOCP31-201ENST00000540463 467 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC128657.1-201ENST00000549459 145 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AP001330.4-201ENST00000604350 154 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 MIR432-201ENST00000606207 94 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL022345.1-201ENST00000607292 135 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC023813.4-201ENST00000607580 580 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC005344.1-201ENST00000613391 459 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC084781.2-201ENST00000615568 161 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AL596245.1-201ENST00000618994 362 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC040168.1-201ENST00000623594 991 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 MTND4LP32-201ENST00000636111 270 ntBASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LINC00116Q8NCU8 AC009902.3-201ENST00000606235 2172 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 EOGT-210ENST00000615922 1931 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 ELL2P4-201ENST00000446870 1376 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 SNORD35B-201ENST00000363660 87 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 SNORD42.2-201ENST00000365570 69 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 U1.1-201ENST00000384101 164 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 RNU6-1297P-201ENST00000384415 104 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 MIR514A2-201ENST00000385131 88 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 MIR514A3-201ENST00000385132 88 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 RNU2-62P-201ENST00000410868 191 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 BEND7P1-201ENST00000422058 457 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AL139247.1-201ENST00000422768 325 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 PPIAP3-201ENST00000450588 505 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 Y_RNA.631-201ENST00000459607 101 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC090602.1-201ENST00000469695 252 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC090096.1-201ENST00000489168 390 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 KLHL2P1-201ENST00000508691 521 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC103843.2-201ENST00000530523 682 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC093838.1-201ENST00000613014 469 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 uc_338.15-201ENST00000615470 191 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 Z82217.1-201ENST00000625157 8149 ntBASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
LINC00116Q8NCU8 AC097461.1-201ENST00000568928 2821 ntBASIC5.09□□□□□ -1.6
LINC00116Q8NCU8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.09□□□□□ -1.6
LINC00116Q8NCU8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.09□□□□□ -1.6
LINC00116Q8NCU8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 Y_RNA.22-201ENST00000362492 102 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 RNA5SP22-201ENST00000365393 109 ntBASIC5.08□□□□□ -1.6
LINC00116Q8NCU8 MIR454-201ENST00000390180 115 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms