Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 RNU6-76P-201ENST00000384060 104 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 SNORA7.4-201ENST00000384249 137 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 RNA5SP252-201ENST00000391131 119 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL353678.1-201ENST00000422735 741 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 TXNL1P1-201ENST00000429528 554 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL356867.1-201ENST00000429623 299 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC092573.2-201ENST00000434546 243 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC002381.1-201ENST00000447049 280 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 BX510359.1-201ENST00000456973 237 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 RPL31P50-201ENST00000471002 296 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 TXNP6-201ENST00000510190 310 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 PHBP14-201ENST00000512887 367 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 SNORA64.4-201ENST00000516632 81 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC109446.2-201ENST00000567872 497 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 MIR5004-201ENST00000579078 107 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 VN1R82P-201ENST00000601481 356 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 HSPE1P7-201ENST00000604681 321 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL158042.1-201ENST00000605338 460 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AL139418.1-201ENST00000613613 177 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC100793.4-201ENST00000613683 429 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC009039.2-201ENST00000624524 529 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC116618.1-201ENST00000634617 774 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 FAM35BP-202ENST00000497389 3337 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 AC233263.6-201ENST00000631132 1963 ntBASIC3.25□□□□□ -1.89
RTL3Q8N8U3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RTL3Q8N8U3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AL391994.1-201ENST00000254724 282 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 OR1S2-201ENST00000302592 978 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RNU6-97P-201ENST00000363387 104 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RNU6-931P-201ENST00000363850 107 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RNU4-40P-201ENST00000364351 143 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 CD24P4-201ENST00000382840 243 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC245291.1-201ENST00000419501 328 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MTND2P18-201ENST00000419962 1030 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC090774.1-201ENST00000435925 246 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 UBE2D3P1-201ENST00000436669 444 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MTCYBP3-201ENST00000445588 1137 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AL133217.1-201ENST00000450980 425 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RN7SL504P-201ENST00000494496 287 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MTND1P22-201ENST00000510572 951 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 RNU6-714P-201ENST00000516963 103 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC125611.2-201ENST00000551907 647 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 CYCSP2-201ENST00000558168 301 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MIR3609-201ENST00000582661 80 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 MIR4999-201ENST00000585029 91 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC006270.3-201ENST00000605967 1036 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC004067.1-201ENST00000608733 700 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC096577.2-201ENST00000611455 153 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC018816.2-201ENST00000621460 353 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC018692.3-201ENST00000623929 123 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AL159972.1-201ENST00000625150 448 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AC087359.1-201ENST00000508335 1740 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 AP000526.1-201ENST00000603308 1388 ntBASIC3.24□□□□□ -1.89
RTL3Q8N8U3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.24□□□□□ -1.89
RTL3Q8N8U3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms