Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SYNE4Q8N205 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SYNE4Q8N205 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 Y_RNA.142-201ENST00000363491 102 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 RPS20P2-201ENST00000402520 389 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 FAT1P1-201ENST00000406588 507 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 RPS20P15-201ENST00000412792 311 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC017079.2-201ENST00000416102 485 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 PDCL2P1-201ENST00000419302 352 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 GTF2IP20-201ENST00000431663 360 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 NDUFB1P1-201ENST00000435191 180 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC132479.1-201ENST00000449160 144 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 RPL21P10-201ENST00000463521 490 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 RN7SKP83-201ENST00000516512 178 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 LARP7P2-201ENST00000575306 125 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 MTCO3P13-201ENST00000577757 781 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AL050343.2-201ENST00000607338 280 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 AL355365.1-201ENST00000616480 294 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 AL445437.1-201ENST00000623157 3087 ntBASIC4.57□□□□□ -1.68
SYNE4Q8N205 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
SYNE4Q8N205 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SYNE4Q8N205 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 RNU6-359P-201ENST00000365466 108 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 MIR649-201ENST00000384843 97 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 DHFRP6-201ENST00000401776 268 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 ZNF90P2-204ENST00000419323 1075 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 PIGFP2-201ENST00000421400 651 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 TAAR7P-201ENST00000436141 242 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 ARPC3P1-201ENST00000437218 533 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 RPL17P49-201ENST00000443728 411 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 MTCO3P2-201ENST00000457365 171 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 RN7SL807P-201ENST00000470923 297 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC007182.2-201ENST00000489251 402 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC112204.1-201ENST00000502591 103 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC114967.1-201ENST00000504890 259 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 CKS1BP3-201ENST00000600888 237 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC006077.1-201ENST00000604746 343 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AL137843.1-201ENST00000605078 385 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 BNIP3P10-201ENST00000605360 577 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.56□□□□□ -1.68
SYNE4Q8N205 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SYNE4Q8N205 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.56□□□□□ -1.68
SYNE4Q8N205 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SYNE4Q8N205 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SYNE4Q8N205 Y_RNA.58-201ENST00000362807 102 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNU6-451P-201ENST00000362921 107 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 Y_RNA.154-201ENST00000363624 102 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNU1-33P-201ENST00000364249 162 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNU6-343P-201ENST00000364709 104 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNY3P1-201ENST00000365085 102 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 RNY3-201ENST00000365484 102 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 Y_RNA.490-201ENST00000384413 102 ntBASIC4.55□□□□□ -1.68
SYNE4Q8N205 MTND3P17-201ENST00000416968 344 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms