Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 SNORA48.5-201ENST00000391143 135 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 RPL7P25-201ENST00000404151 721 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 RPS3AP24-201ENST00000407896 734 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC236972.1-201ENST00000433225 199 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 MTCO2P16-201ENST00000436962 677 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AL592447.1-201ENST00000447592 540 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 ST13P20-201ENST00000447996 1065 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC084198.1-201ENST00000477747 402 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 DEFB108D-201ENST00000527787 222 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AP002453.2-201ENST00000533503 320 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC087752.4-201ENST00000605911 462 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 RNU6-87P-201ENST00000607561 108 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC138749.5-201ENST00000611461 208 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC116165.2-201ENST00000616705 206 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC009159.1-201ENST00000618386 642 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 MIR6852-201ENST00000621699 66 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AL672296.1-201ENST00000427780 2158 ntBASIC3.94□□□□□ -1.78
HERC6Q8IVU3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HERC6Q8IVU3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC138915.3-201ENST00000562908 1389 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 U3.19-201ENST00000390893 196 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 RNU2-8P-201ENST00000410727 190 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC078974.1-201ENST00000411597 223 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 RPL27AP8-201ENST00000424277 446 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC090774.1-201ENST00000435925 246 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC092473.1-201ENST00000441098 221 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL360221.1-201ENST00000445989 335 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 TPT1P14-201ENST00000448018 505 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC006480.1-201ENST00000449887 378 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 SSXP1-201ENST00000453640 473 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL033528.1-201ENST00000453780 140 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC025518.1-201ENST00000479856 347 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MTND4P2-201ENST00000507767 1203 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AP000857.1-201ENST00000532151 543 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC125611.2-201ENST00000551907 647 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL356432.3-201ENST00000568952 465 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MIR3682-201ENST00000581338 84 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MIR548AB-201ENST00000584917 84 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC005771.1-201ENST00000585581 349 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 RN7SKP299-201ENST00000606679 301 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC090425.2-201ENST00000608818 501 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC135507.2-201ENST00000612443 309 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MIR7112-201ENST00000616126 65 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC095031.1-201ENST00000623685 672 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AL138713.1-201ENST00000624026 2130 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 AC009812.4-201ENST00000569134 1805 ntBASIC3.93□□□□□ -1.78
HERC6Q8IVU3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
HERC6Q8IVU3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 RNU4-35P-201ENST00000362588 141 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 Y_RNA.318-201ENST00000365131 97 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 DEFB109C-201ENST00000382575 264 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 DEFB109B-201ENST00000382656 264 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 RNU6-76P-201ENST00000384060 104 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 U3.26-201ENST00000391236 204 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 CCNG1P1-201ENST00000406783 885 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 MIR1290-201ENST00000408735 78 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms