Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 AC007529.1-201ENST00000418574 2178 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 IRF5P1-201ENST00000504852 2164 ntBASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SH3RF1Q7Z6J0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
SH3RF1Q7Z6J0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SH3RF1Q7Z6J0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SH3RF1Q7Z6J0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 SNURFL-201ENST00000309296 343 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.65-201ENST00000362846 100 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.183-201ENST00000363882 113 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 RNU1-146P-201ENST00000364015 165 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-1027P-201ENST00000383998 107 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-611P-201ENST00000384276 104 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-378P-201ENST00000384324 107 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 RPL31P2-201ENST00000413849 377 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 DPPA2P2-201ENST00000418220 897 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 EI24P4-201ENST00000423683 1078 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 VN1R105P-201ENST00000486595 910 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 SNORA31.6-201ENST00000516241 130 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 snoU109.6-201ENST00000516831 118 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 AC024940.3-201ENST00000538551 316 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 CR383656.7-201ENST00000548164 174 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 AC009852.2-201ENST00000567898 485 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 AC004584.2-201ENST00000570407 410 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 PRPF19P1-201ENST00000584766 898 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 MAPK10-328ENST00000641553 4009 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 AC000374.1-201ENST00000434698 1745 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 DNM1P47-203ENST00000571780 12667 ntBASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SH3RF1Q7Z6J0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 MIR335-201ENST00000362173 94 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 MIR589-201ENST00000385238 99 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RPS15AP6-201ENST00000420703 385 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 CYCSP43-201ENST00000438233 310 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 GAPDHP27-201ENST00000447427 1020 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-911P-201ENST00000516523 104 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-352P-201ENST00000516908 107 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC034114.1-201ENST00000520293 285 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC074050.1-201ENST00000563247 211 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC022884.2-201ENST00000578535 580 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 MIR5692A1-201ENST00000580523 69 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC068790.4-201ENST00000602474 263 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC073410.2-201ENST00000603240 332 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AL160281.1-201ENST00000605307 311 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 AC123768.4-201ENST00000616244 701 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 SAGE4P-201ENST00000442271 3381 ntBASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.95□□□□□ -1.46
SH3RF1Q7Z6J0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AL391987.6-201ENST00000305671 199 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 Y_RNA.54-201ENST00000362766 105 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RNY1-201ENST00000364228 113 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-933P-201ENST00000384424 107 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 AL590704.1-201ENST00000402856 794 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RNU2-21P-201ENST00000410368 188 ntBASIC5.94□□□□□ -1.46
SH3RF1Q7Z6J0 RNU6-1140P-201ENST00000410517 106 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms