Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL024474.1-201ENST00000404655 591 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 MTCO3P12-201ENST00000416718 547 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 XKRYP1-201ENST00000423438 492 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL139415.2-201ENST00000431968 163 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 XKRYP2-201ENST00000432915 492 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 ATP5F1P1-201ENST00000433775 569 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL603825.1-201ENST00000438481 80 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 HMGB1P15-201ENST00000453854 435 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL049830.2-201ENST00000480072 201 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 RN7SL283P-201ENST00000489055 303 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 RN7SKP287-201ENST00000516546 266 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC008127.2-201ENST00000549925 1075 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 SYF2P1-201ENST00000550658 413 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL391156.1-201ENST00000554965 554 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC090695.1-201ENST00000561269 1222 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC061975.8-201ENST00000587058 721 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC093424.1-201ENST00000604999 338 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC080013.3-201ENST00000606839 578 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC005332.6-201ENST00000613178 446 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC140725.3-201ENST00000616193 880 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC009159.2-201ENST00000617603 606 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AL355493.4-201ENST00000618530 292 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC018755.4-201ENST00000619715 454 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC040168.1-201ENST00000623594 991 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC004925.1-201ENST00000624256 2706 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 AC107982.1-201ENST00000507171 1300 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RNU6-83P-201ENST00000384568 112 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RNU2-28P-201ENST00000410457 189 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AL008987.1-201ENST00000415528 237 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 HIGD1AP15-201ENST00000416198 280 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RPL22P18-201ENST00000417197 377 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 SRIP2-201ENST00000428470 166 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 MTCO2P20-201ENST00000437339 673 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 CFTRP1-201ENST00000456646 183 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 OR6K1P-201ENST00000456766 971 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 HMGN2P16-201ENST00000456802 261 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC118282.1-201ENST00000506408 765 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC004062.1-201ENST00000509926 645 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RN7SKP43-201ENST00000516173 320 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 Y_RNA.717-201ENST00000517106 92 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 MRPS36P3-201ENST00000519284 130 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC009063.1-201ENST00000563342 702 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC022662.1-201ENST00000580252 331 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC022022.2-201ENST00000602989 360 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AL451074.6-201ENST00000608512 729 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC090425.2-201ENST00000608818 501 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AP001521.1-201ENST00000609150 300 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC090115.4-201ENST00000609970 188 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC008083.4-201ENST00000615076 444 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.61□□□□□ -1.83
NPHP3Q7Z494 AC008264.2-201ENST00000610193 3731 ntBASIC3.61□□□□□ -1.83
NPHP3Q7Z494 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 MIR518C-201ENST00000384822 101 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AL450338.1-201ENST00000407987 512 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AC068533.2-201ENST00000411872 306 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AL590103.1-201ENST00000434488 307 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AC009969.1-201ENST00000438726 172 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 RPL21P134-201ENST00000453468 483 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AL024509.2-201ENST00000493462 493 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AC116353.3-201ENST00000511215 249 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 RNU6-991P-201ENST00000516168 107 ntBASIC3.6□□□□□ -1.83
NPHP3Q7Z494 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.6□□□□□ -1.83
NPHP3Q7Z494 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms