Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC025048.6-202ENST00000627667 438 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AL359851.1-201ENST00000569460 4997 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 RNA5SP27-201ENST00000363839 119 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 Y_RNA.251-201ENST00000364551 99 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC090255.1-201ENST00000495779 349 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 TBCAP3-201ENST00000512475 312 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 MTND5P4-201ENST00000514978 288 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC018754.1-201ENST00000607486 925 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AC010809.3-201ENST00000621310 641 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 AL121594.5-201ENST00000631724 573 ntBASIC1.1□□□□□ -2.23
CSMD3Q7Z407 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
CSMD3Q7Z407 DNAJC19P6-201ENST00000401853 280 ntBASIC1.09□□□□□ -2.23
CSMD3Q7Z407 SNORA31.26-201ENST00000517250 137 ntBASIC1.09□□□□□ -2.23
CSMD3Q7Z407 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
CSMD3Q7Z407 AL121821.2-201ENST00000556081 394 ntBASIC1.09□□□□□ -2.23
CSMD3Q7Z407 AC022079.2-201ENST00000619739 566 ntBASIC1.09□□□□□ -2.23
CSMD3Q7Z407 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RN7SKP101-201ENST00000411376 320 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AL645568.3-201ENST00000433683 316 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 TPRKBP1-201ENST00000456243 481 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 NIFKP8-201ENST00000560500 874 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 DPPA2P1-201ENST00000428060 556 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AC244505.5-201ENST00000443639 207 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RPL7P5-201ENST00000471472 736 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RNA5SP436-201ENST00000516020 115 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RNU6-405P-201ENST00000516637 110 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 RNU6-467P-201ENST00000517027 110 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 MIR4419B-201ENST00000577260 68 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 KATNBL1P1-201ENST00000605192 748 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.09□□□□□ -2.24
CSMD3Q7Z407 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.24
CSMD3Q7Z407 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 RPL35AP22-201ENST00000436855 335 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL359273.1-201ENST00000510918 627 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 PRELID2P1-201ENST00000552837 301 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL589935.2-201ENST00000616471 1231 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 MIR520E-201ENST00000384867 87 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 BX510359.4-201ENST00000423750 193 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AC093084.1-201ENST00000424233 687 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AC090774.1-201ENST00000435925 246 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 TPT1P14-201ENST00000448018 505 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 FAM106DP-201ENST00000586416 501 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AC013444.2-201ENST00000603317 787 ntBASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CSMD3Q7Z407 AL157700.1-201ENST00000561973 1432 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 RNU6-50P-201ENST00000362356 103 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 Y_RNA.393-201ENST00000383936 102 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 MTCYBP18-201ENST00000501056 747 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AL049838.1-201ENST00000563647 981 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 RMST_6.1-201ENST00000611980 203 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC007256.1-201ENST00000392253 2765 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 SGO1P2-201ENST00000429458 1589 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC010683.1-201ENST00000473673 378 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 TRAV28-201ENST00000557548 323 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 BNIP3P4-201ENST00000604946 565 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC068944.2-201ENST00000610373 403 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 RNU1-101P-201ENST00000391171 127 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.07□□□□□ -2.24
CSMD3Q7Z407 SNRPGP15-201ENST00000600149 222 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AL391646.1-201ENST00000603860 190 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC092954.1-201ENST00000609121 445 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 AC008121.3-201ENST00000618726 433 ntBASIC1.07□□□□□ -2.24
CSMD3Q7Z407 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms