Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RNU1-45P-201ENST00000517191 141 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC023632.4-201ENST00000517783 191 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AP003072.2-201ENST00000527756 676 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 CYCSP30-201ENST00000546447 172 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC034105.3-201ENST00000565294 442 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC025627.2-201ENST00000576220 160 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 BNIP3P9-201ENST00000603714 553 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MIR6868-201ENST00000611215 58 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC006329.2-201ENST00000611491 394 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC104260.1-201ENST00000616660 539 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC022140.2-201ENST00000623500 188 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC005609.4-201ENST00000625071 447 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MIR3662-201ENST00000637030 95 ntBASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
C9orf139Q6ZV77 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC073544.1-201ENST00000600110 1595 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 MIR448-201ENST00000362131 111 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNA5SP52-201ENST00000362448 134 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNU6-797P-201ENST00000363101 109 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNU6-694P-201ENST00000364071 147 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNU6-108P-201ENST00000365558 107 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNU6-1158P-201ENST00000391167 107 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RN7SKP285-201ENST00000410137 318 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC005517.2-201ENST00000424673 553 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC018644.1-201ENST00000429934 551 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL358472.1-201ENST00000431295 329 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL606489.2-201ENST00000433886 234 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RAC1P7-201ENST00000445367 377 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL133547.1-201ENST00000448546 220 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 NANOGP10-201ENST00000453325 895 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL121877.1-201ENST00000453704 622 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RPL23AP2-201ENST00000471227 466 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RPL36AP51-201ENST00000487216 318 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL139099.1-201ENST00000497398 403 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC008628.2-201ENST00000502605 298 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 SCARNA24.1-201ENST00000516465 137 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 RNU7-143P-201ENST00000516781 65 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL359212.1-201ENST00000556608 614 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 KC877982.1-201ENST00000602313 470 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AL162413.1-201ENST00000603198 110 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 Z84480.1-201ENST00000605131 311 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 MIR432-201ENST00000606207 94 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC245517.5-201ENST00000611529 162 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 uc_338.12-201ENST00000616344 181 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC002550.2-201ENST00000621246 394 ntBASIC3.26□□□□□ -1.89
C9orf139Q6ZV77 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms