Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RPS29P17-201ENST00000430795 166 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MTCO3P45-201ENST00000443036 613 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AL121871.1-201ENST00000443413 436 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 ISCUP1-201ENST00000454451 448 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 RPL7P20-201ENST00000520308 745 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AP000827.1-201ENST00000527814 258 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AL137161.1-201ENST00000532231 390 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 SCOCP1-201ENST00000554676 349 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 ARF4P1-201ENST00000605447 541 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC020634.1-201ENST00000608701 549 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 PART1_1.1-201ENST00000611761 217 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC090229.1-201ENST00000590983 1609 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AL672167.1-203ENST00000641299 2975 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC121333.1-201ENST00000567488 2709 ntBASIC5.03□□□□□ -1.6
RUFY4Q6ZNE9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.67-201ENST00000362870 100 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 RNA5SP515-201ENST00000364570 118 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.387-201ENST00000383918 102 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-356P-201ENST00000384140 107 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 SNORA24.1-201ENST00000384401 135 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-831P-201ENST00000384548 107 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL592114.1-201ENST00000403842 483 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL590004.1-201ENST00000405321 300 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL080315.1-201ENST00000406055 466 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 USP9YP20-201ENST00000419224 558 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 PPP1R2P5-201ENST00000457256 603 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 TTC39CP1-201ENST00000512513 755 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC026801.2-201ENST00000515352 425 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 RNA5SP360-201ENST00000516555 118 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 CYCSP29-201ENST00000533731 318 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 HPRT1P3-201ENST00000539521 576 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL161729.3-201ENST00000603533 673 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC091979.2-201ENST00000607514 214 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.02□□□□□ -1.61
RUFY4Q6ZNE9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 API5P2-201ENST00000397055 1498 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.58-201ENST00000362807 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.154-201ENST00000363624 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.184-201ENST00000363884 108 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RNY3P1-201ENST00000365085 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.315-201ENST00000365117 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RNY3-201ENST00000365484 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.490-201ENST00000384413 102 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 MIR153-1-201ENST00000384914 90 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AL359634.1-202ENST00000404721 284 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 EIF4A1P3-201ENST00000411521 244 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 NDUFB4P5-201ENST00000415445 361 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-1208P-201ENST00000459588 107 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC008481.1-201ENST00000463278 396 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RPL7AP28-201ENST00000464513 571 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RN7SL303P-201ENST00000469773 251 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms