Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RPL7L1P10-201ENST00000427790 463 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-1208P-201ENST00000459588 107 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AC004801.2-202ENST00000463559 283 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 RN7SL132P-201ENST00000478131 296 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL132838.2-201ENST00000492041 314 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AC007546.1-201ENST00000619452 559 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 MIR8059-201ENST00000620427 81 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AL359757.2-201ENST00000624309 274 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 AC107027.3-201ENST00000565095 3473 ntBASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PRPF40BQ6NWY9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.146-201ENST00000363549 102 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RN7SKP44-201ENST00000363602 316 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-178P-201ENST00000384631 104 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 MIR554-201ENST00000384874 96 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AL592114.1-201ENST00000403842 483 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RNU2-36P-201ENST00000410361 191 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC074085.1-201ENST00000413598 418 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC245054.2-201ENST00000415639 319 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AL139095.3-201ENST00000419672 1203 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AL117339.2-201ENST00000430475 180 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 EIF4A1P11-201ENST00000451239 222 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RPL36AP13-201ENST00000457490 317 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RNA5SP143-201ENST00000516936 115 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 RNU1-45P-201ENST00000517191 141 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC109635.4-202ENST00000531666 412 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 MIR4716-201ENST00000579628 84 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC233702.9-201ENST00000581528 203 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 MIR4424-201ENST00000585257 86 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 MIR3942-201ENST00000585264 109 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC136443.5-201ENST00000603741 370 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 uc_338.13-201ENST00000618243 179 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC025034.2-201ENST00000623264 286 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 CPHL1P-201ENST00000461341 3407 ntBASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.54□□□□□ -1.52
PRPF40BQ6NWY9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AL158163.1-201ENST00000603915 1649 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-1287P-201ENST00000362914 107 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 U3.12-201ENST00000364498 214 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 Y_RNA.378-201ENST00000365652 113 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-432P-201ENST00000384196 109 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-1060P-201ENST00000384664 107 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNA5SP44-201ENST00000410446 133 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-370P-201ENST00000411008 104 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-1304P-201ENST00000411374 106 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-516P-201ENST00000411381 104 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RPL37P10-201ENST00000412884 288 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AL139396.1-201ENST00000421137 167 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RPS17P13-201ENST00000448974 407 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC002553.2-201ENST00000453217 340 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 RNU6-27P-201ENST00000516146 107 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AP000889.2-201ENST00000532684 490 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AL118558.2-201ENST00000556294 238 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AC124303.1-201ENST00000605703 360 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 AP001005.3-201ENST00000622049 129 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 MTND5P16-201ENST00000460269 1703 ntBASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PRPF40BQ6NWY9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF40BQ6NWY9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms