Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC040904.1-201ENST00000590850 223 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC009090.3-201ENST00000616553 565 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC008443.7-201ENST00000622195 246 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 Z69908.1-201ENST00000622603 247 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 AC007256.1-201ENST00000392253 2765 ntBASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LYSMD4Q5XG99 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RNU6-853P-201ENST00000364306 107 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 Y_RNA.318-201ENST00000365131 97 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RNU6-882P-201ENST00000391025 103 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 MIR1305-201ENST00000408300 86 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RN7SKP56-201ENST00000410513 331 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 SSXP9-201ENST00000417503 292 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL158071.1-201ENST00000430315 461 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL121871.1-201ENST00000443413 436 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RPL36AP33-201ENST00000450395 310 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 SNORD121B-201ENST00000458838 81 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC021382.1-201ENST00000483523 359 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC022447.3-201ENST00000506865 495 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 OR5BM1P-201ENST00000512021 366 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RN7SKP83-201ENST00000516512 178 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RNU6-528P-201ENST00000516926 100 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 IGKV2D-23-201ENST00000518179 286 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC103783.1-201ENST00000520506 373 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC106038.2-201ENST00000520706 568 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC008489.1-201ENST00000524271 483 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AP004247.1-201ENST00000531556 1289 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL360157.1-201ENST00000565962 87 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC012414.6-201ENST00000568241 401 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC034268.2-201ENST00000571784 482 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 U73023.1-201ENST00000603134 700 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 HMGB1P50-201ENST00000605814 607 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 AC135507.1-201ENST00000607214 561 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 MIR7106-201ENST00000612419 65 ntBASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LYSMD4Q5XG99 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 RNU4-21P-201ENST00000362802 126 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 RNU1-18P-201ENST00000363062 164 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC129850.1-201ENST00000436203 508 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AL512286.1-201ENST00000439244 400 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AL356535.1-201ENST00000440335 398 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 HMGB3P22-202ENST00000451823 572 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC234775.1-201ENST00000454247 670 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC104308.1-201ENST00000454621 333 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC109486.1-201ENST00000486833 374 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC034222.1-201ENST00000494052 532 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AP003497.1-201ENST00000528472 562 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AP002404.1-201ENST00000532005 451 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC009101.1-201ENST00000568135 242 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AP001004.1-201ENST00000582468 324 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 MIR548AB-201ENST00000584917 84 ntBASIC3.28□□□□□ -1.88
LYSMD4Q5XG99 AP001029.3-201ENST00000588063 596 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms