Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AC073073.2-201ENST00000609827 2578 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-BQ31612 RNVU1-3-201ENST00000364313 161 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RNA5SP235-201ENST00000365411 114 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RNU6-769P-201ENST00000384407 104 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 Y_RNA.493-201ENST00000384422 102 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RNY3P10-201ENST00000384764 102 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 RN7SKP266-201ENST00000410232 287 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-BQ31612 MTCO2P34-201ENST00000421994 607 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RPS27AP14-201ENST00000422868 454 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 USP9YP36-201ENST00000424581 829 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-BQ31612 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AL031667.1-201ENST00000440222 725 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AP000542.1-201ENST00000448473 371 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 OR6K1P-201ENST00000456766 971 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 RPL21P104-201ENST00000464143 478 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC023424.2-201ENST00000493479 777 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 CBX3P3-201ENST00000508108 532 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 POU5F1P7-201ENST00000508759 541 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AF131216.2-201ENST00000512316 564 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC025881.1-201ENST00000518851 512 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AP002748.2-201ENST00000528671 348 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AC005476.1-201ENST00000554427 397 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 MIR4307-201ENST00000582802 84 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC090425.2-201ENST00000608818 501 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC006023.2-201ENST00000609916 167 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-BQ31612 AC104010.1-201ENST00000616889 150 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AL357080.1-201ENST00000617394 239 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 U7.8-201ENST00000619968 63 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC040168.1-201ENST00000623594 991 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 AC025048.6-202ENST00000627667 438 ntBASIC3.23□□□□□ -1.89
HLA-BQ31612 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-BQ31612 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-BQ31612 RNU1-18P-201ENST00000363062 164 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU5F-7P-201ENST00000363696 115 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 Y_RNA.359-201ENST00000365498 102 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU6-744P-201ENST00000365557 107 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU6-1316P-201ENST00000384242 108 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 SNORA44-201ENST00000384584 132 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AL138880.1-201ENST00000405824 642 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AL159169.1-201ENST00000421119 127 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RPL35AP12-201ENST00000425362 338 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 HMGB1P12-201ENST00000438594 598 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-BQ31612 ST13P20-201ENST00000447996 1065 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC140076.1-201ENST00000449897 361 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU6-956P-201ENST00000458868 103 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU7-170P-201ENST00000459303 61 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 VN1R17P-201ENST00000472048 1090 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AP000797.1-201ENST00000478870 387 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 FAM172BP-201ENST00000487497 1089 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RPL7P47-201ENST00000497299 556 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RPL23AP55-201ENST00000498163 452 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-BQ31612 BTF3L4P4-201ENST00000506381 449 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC079140.3-201ENST00000511111 550 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC021146.1-201ENST00000511202 716 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC024589.1-201ENST00000512207 263 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 MTND3P5-201ENST00000512798 333 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RNU6-27P-201ENST00000516146 107 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 RN7SKP244-201ENST00000516513 307 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AP006245.1-201ENST00000522549 120 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-BQ31612 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.22□□□□□ -1.89
HLA-BQ31612 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-BQ31612 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-BQ31612 AC012213.3-201ENST00000577199 777 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC015917.1-201ENST00000579654 510 ntBASIC3.22□□□□□ -1.89
HLA-BQ31612 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms