Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 AC015849.6-201ENST00000605454 474 ntBASIC2.18□□□□□ -2.06
CPSF1Q10570 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF1Q10570 AC007275.1-201ENST00000621243 671 ntBASIC2.18□□□□□ -2.06
CPSF1Q10570 AC098679.5-201ENST00000624394 571 ntBASIC2.18□□□□□ -2.06
CPSF1Q10570 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CPSF1Q10570 AC005539.1-201ENST00000443768 1479 ntBASIC2.18□□□□□ -2.06
CPSF1Q10570 HMGB1P5-201ENST00000255320 642 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPSF1Q10570 RNU6-60P-201ENST00000364792 103 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AL030996.1-201ENST00000411430 235 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 NCOR1P1-202ENST00000486162 291 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 MTCO2P9-201ENST00000503214 694 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.17□□□□□ -2.06
CPSF1Q10570 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC026241.1-201ENST00000517873 2142 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AC087373.1-201ENST00000524920 491 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 SNORD84-203ENST00000584275 78 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AL713998.2-201ENST00000604538 1198 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AL161912.3-201ENST00000605404 628 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 SNORA7.2-201ENST00000364446 145 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 MIR524-201ENST00000385242 87 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 RNU2-68P-201ENST00000410878 191 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AC013404.1-201ENST00000413068 249 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC092798.1-201ENST00000458542 409 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.17□□□□□ -2.06
CPSF1Q10570 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 RNA5SP364-201ENST00000516938 78 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 RN7SKP234-201ENST00000517173 224 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AC084851.1-201ENST00000529105 249 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AC012360.2-201ENST00000609349 391 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AL390240.1-201ENST00000612950 384 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 AC116563.2-201ENST00000624751 535 ntBASIC2.17□□□□□ -2.06
CPSF1Q10570 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.17□□□□□ -2.06
CPSF1Q10570 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CPSF1Q10570 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CPSF1Q10570 AC096656.1-201ENST00000623826 1364 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 AC135776.4-201ENST00000624300 1904 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF1Q10570 RNU2-71P-201ENST00000411395 189 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 POLHP1-201ENST00000411806 470 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 AC004022.2-201ENST00000413824 193 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 AC093716.1-201ENST00000435923 377 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 RPL37P6-202ENST00000464216 403 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 AC087441.2-201ENST00000529141 262 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF1Q10570 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.16□□□□□ -2.06
CPSF1Q10570 ARL2BPP2-201ENST00000550907 489 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.16□□□□□ -2.06
CPSF1Q10570 OR4K8P-201ENST00000578842 1048 ntBASIC2.16□□□□□ -2.06
CPSF1Q10570 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.16□□□□□ -2.06
CPSF1Q10570 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CPSF1Q10570 AL109809.4-201ENST00000603520 2185 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC006026.1-201ENST00000444025 1803 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 Y_RNA.355-201ENST00000365462 98 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 RNU6-174P-201ENST00000410406 106 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.15□□□□□ -2.07
CPSF1Q10570 RPS3AP9-201ENST00000417027 792 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.15□□□□□ -2.07
CPSF1Q10570 NF1P3-201ENST00000457709 450 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 RPL30P11-201ENST00000495304 339 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC096571.1-202ENST00000506634 735 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.15□□□□□ -2.07
CPSF1Q10570 AC021146.7-201ENST00000509604 775 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.15□□□□□ -2.07
CPSF1Q10570 CENPUP2-201ENST00000555897 1186 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC024614.2-201ENST00000577584 372 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC245128.3-201ENST00000594721 748 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AP003117.1-201ENST00000602771 554 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 AC007620.3-201ENST00000608131 497 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.15□□□□□ -2.07
CPSF1Q10570 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
CPSF1Q10570 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CPSF1Q10570 AL391987.6-201ENST00000305671 199 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 Y_RNA.40-201ENST00000362645 93 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.14□□□□□ -2.07
CPSF1Q10570 RPS7P2-201ENST00000435134 607 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 ARPC3P1-201ENST00000437218 533 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.14□□□□□ -2.07
CPSF1Q10570 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.14□□□□□ -2.07
CPSF1Q10570 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF1Q10570 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CPSF1Q10570 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.14□□□□□ -2.07
CPSF1Q10570 MTCO2P32-201ENST00000514865 403 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.14□□□□□ -2.07
CPSF1Q10570 SNORD53B-201ENST00000577887 78 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.14□□□□□ -2.07
CPSF1Q10570 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF1Q10570 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.14□□□□□ -2.07
CPSF1Q10570 AL592494.3-201ENST00000609485 464 ntBASIC2.14□□□□□ -2.07
CPSF1Q10570 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CPSF1Q10570 Y_RNA.116-201ENST00000363292 103 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms