Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RN7SKP234-201ENST00000517173 224 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AC069113.1-201ENST00000517763 267 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 MIR3176-201ENST00000582210 90 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 MIR4443-201ENST00000585052 53 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC016727.2-201ENST00000603988 621 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 EIF3FP1-201ENST00000613970 806 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 AC078938.1-201ENST00000620993 318 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDH1Q08174 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.01□□□□□ -1.61
PCDH1Q08174 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDH1Q08174 AL451142.2-201ENST00000429076 2090 ntBASIC5.01□□□□□ -1.61
PCDH1Q08174 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PCDH1Q08174 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PCDH1Q08174 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDH1Q08174 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5□□□□□ -1.61
PCDH1Q08174 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5□□□□□ -1.61
PCDH1Q08174 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5□□□□□ -1.61
PCDH1Q08174 RNU6-371P-201ENST00000364283 108 ntBASIC5□□□□□ -1.61
PCDH1Q08174 Y_RNA.288-201ENST00000364854 92 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RNA5SP223-201ENST00000365174 120 ntBASIC5□□□□□ -1.61
PCDH1Q08174 SNORD14.1-201ENST00000365609 90 ntBASIC5□□□□□ -1.61
PCDH1Q08174 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 Y_RNA.552-201ENST00000384665 112 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RNU6-713P-201ENST00000384761 107 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RNU2-43P-201ENST00000410306 190 ntBASIC5□□□□□ -1.61
PCDH1Q08174 AC007738.1-201ENST00000413892 348 ntBASIC5□□□□□ -1.61
PCDH1Q08174 SSXP9-201ENST00000417503 292 ntBASIC5□□□□□ -1.61
PCDH1Q08174 SYF2P2-201ENST00000417620 583 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RPS15AP10-201ENST00000432472 382 ntBASIC5□□□□□ -1.61
PCDH1Q08174 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 RPL12P46-201ENST00000436610 195 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RPS29P10-201ENST00000439197 166 ntBASIC5□□□□□ -1.61
PCDH1Q08174 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5□□□□□ -1.61
PCDH1Q08174 RPL7AP61-201ENST00000443410 636 ntBASIC5□□□□□ -1.61
PCDH1Q08174 AC108161.1-201ENST00000461060 402 ntBASIC5□□□□□ -1.61
PCDH1Q08174 AC091180.1-201ENST00000462104 372 ntBASIC5□□□□□ -1.61
PCDH1Q08174 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5□□□□□ -1.61
PCDH1Q08174 AC105758.1-201ENST00000506038 399 ntBASIC5□□□□□ -1.61
PCDH1Q08174 SNORA31.3-201ENST00000516029 96 ntBASIC5□□□□□ -1.61
PCDH1Q08174 RNU2-53P-201ENST00000516257 147 ntBASIC5□□□□□ -1.61
PCDH1Q08174 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5□□□□□ -1.61
PCDH1Q08174 AC006349.1-201ENST00000555526 235 ntBASIC5□□□□□ -1.61
PCDH1Q08174 AC127381.1-201ENST00000555979 939 ntBASIC5□□□□□ -1.61
PCDH1Q08174 MIR5692A1-201ENST00000580523 69 ntBASIC5□□□□□ -1.61
PCDH1Q08174 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5□□□□□ -1.61
PCDH1Q08174 IMMP1LP3-201ENST00000604197 224 ntBASIC5□□□□□ -1.61
PCDH1Q08174 BX005214.3-202ENST00000619809 325 ntBASIC5□□□□□ -1.61
PCDH1Q08174 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PCDH1Q08174 MTND5P7-201ENST00000413558 1798 ntBASIC5□□□□□ -1.61
PCDH1Q08174 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDH1Q08174 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5□□□□□ -1.61
PCDH1Q08174 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PCDH1Q08174 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH1Q08174 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 STX3-208ENST00000641815 3236 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDH1Q08174 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDH1Q08174 U3.2-201ENST00000362981 210 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDH1Q08174 RNU6-178P-201ENST00000384631 104 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 RN7SKP16-201ENST00000410180 299 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 RPL21P90-201ENST00000415692 466 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 COX6CP13-201ENST00000428703 226 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 CFL1P1-202ENST00000432948 411 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC073063.1-201ENST00000434352 607 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AL121871.1-201ENST00000443413 436 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 RPS11P1-201ENST00000451072 473 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 SUMO1P2-201ENST00000452524 304 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 PCMTD1P1-201ENST00000455560 355 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AP000942.1-201ENST00000463969 747 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC008571.1-201ENST00000467232 300 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC011005.2-201ENST00000487324 359 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC018437.1-201ENST00000492214 406 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC027308.1-201ENST00000517993 110 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC007991.1-201ENST00000522680 631 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC104576.1-201ENST00000524225 88 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDH1Q08174 AC009643.1-201ENST00000532030 391 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC051619.2-201ENST00000559063 397 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC084783.1-201ENST00000565846 910 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC093227.2-201ENST00000589357 285 ntBASIC4.99□□□□□ -1.61
PCDH1Q08174 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms