Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.59□□□□□ -1.83
LTBQ06643 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 SCARNA15.3-201ENST00000626315 122 ntBASIC3.59□□□□□ -1.83
LTBQ06643 SCARNA4.1-201ENST00000628597 123 ntBASIC3.59□□□□□ -1.83
LTBQ06643 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.59□□□□□ -1.83
LTBQ06643 MIR3662-201ENST00000637030 95 ntBASIC3.59□□□□□ -1.83
LTBQ06643 AC009093.8-201ENST00000641769 292 ntBASIC3.59□□□□□ -1.83
LTBQ06643 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
LTBQ06643 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
LTBQ06643 FAM35DP-201ENST00000323387 2712 ntBASIC3.59□□□□□ -1.83
LTBQ06643 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LTBQ06643 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
LTBQ06643 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
LTBQ06643 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LTBQ06643 AC092326.2-201ENST00000624772 1561 ntBASIC3.59□□□□□ -1.84
LTBQ06643 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 MAPK10-373ENST00000641983 6772 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC092125.1-201ENST00000562568 1995 ntBASIC3.58□□□□□ -1.84
LTBQ06643 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 RPL23AP32-201ENST00000395315 459 ntBASIC3.58□□□□□ -1.84
LTBQ06643 RPL31P1-201ENST00000398116 372 ntBASIC3.58□□□□□ -1.84
LTBQ06643 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 AL024474.1-201ENST00000404655 591 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AL603766.1-201ENST00000407763 664 ntBASIC3.58□□□□□ -1.84
LTBQ06643 MIR1251-201ENST00000408552 70 ntBASIC3.58□□□□□ -1.84
LTBQ06643 RPL21P111-201ENST00000418453 477 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 MTCO2P5-201ENST00000422621 426 ntBASIC3.58□□□□□ -1.84
LTBQ06643 RPS12P5-201ENST00000423449 371 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBQ06643 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBQ06643 ATP5HP2-201ENST00000433885 485 ntBASIC3.58□□□□□ -1.84
LTBQ06643 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBQ06643 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
LTBQ06643 SDCBPP1-201ENST00000440192 890 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 RPL23AP20-201ENST00000447965 421 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 RPS20P32-201ENST00000456044 356 ntBASIC3.58□□□□□ -1.84
LTBQ06643 RNU6-420P-201ENST00000458780 107 ntBASIC3.58□□□□□ -1.84
LTBQ06643 PABPC1P3-201ENST00000469174 459 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC034222.1-201ENST00000494052 532 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.58□□□□□ -1.84
LTBQ06643 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AC114786.4-201ENST00000508771 728 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBQ06643 RNU6-1281P-201ENST00000516223 105 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AF235103.2-201ENST00000525753 346 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AP003034.1-201ENST00000534621 422 ntBASIC3.58□□□□□ -1.84
LTBQ06643 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.58□□□□□ -1.84
LTBQ06643 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 MIR3167-201ENST00000579623 85 ntBASIC3.58□□□□□ -1.84
LTBQ06643 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 AL353997.4-201ENST00000586196 166 ntBASIC3.58□□□□□ -1.84
LTBQ06643 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.58□□□□□ -1.84
LTBQ06643 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 AC091953.2-201ENST00000623979 160 ntBASIC3.58□□□□□ -1.84
LTBQ06643 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 CYP3A51P-201ENST00000633513 256 ntBASIC3.58□□□□□ -1.84
LTBQ06643 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
LTBQ06643 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LTBQ06643 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
LTBQ06643 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.57□□□□□ -1.84
LTBQ06643 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.57□□□□□ -1.84
LTBQ06643 RNU4-1-201ENST00000363925 141 ntBASIC3.57□□□□□ -1.84
LTBQ06643 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LTBQ06643 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 RNU6-1009P-201ENST00000390996 107 ntBASIC3.57□□□□□ -1.84
LTBQ06643 PTMAP5-201ENST00000393073 333 ntBASIC3.57□□□□□ -1.84
LTBQ06643 MRPL42P2-201ENST00000403169 426 ntBASIC3.57□□□□□ -1.84
LTBQ06643 AL356776.1-201ENST00000406574 447 ntBASIC3.57□□□□□ -1.84
LTBQ06643 RNU6-908P-201ENST00000410160 94 ntBASIC3.57□□□□□ -1.84
LTBQ06643 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 AC019097.1-201ENST00000424783 735 ntBASIC3.57□□□□□ -1.84
LTBQ06643 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 AC022364.2-201ENST00000457963 554 ntBASIC3.57□□□□□ -1.84
LTBQ06643 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 snoU13.7-201ENST00000459220 104 ntBASIC3.57□□□□□ -1.84
LTBQ06643 PLGLA-201ENST00000465668 449 ntBASIC3.57□□□□□ -1.84
LTBQ06643 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 AC023194.1-201ENST00000493084 308 ntBASIC3.57□□□□□ -1.84
LTBQ06643 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.57□□□□□ -1.84
LTBQ06643 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.57□□□□□ -1.84
LTBQ06643 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.57□□□□□ -1.84
LTBQ06643 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
LTBQ06643 AC093677.1-201ENST00000514414 678 ntBASIC3.57□□□□□ -1.84
LTBQ06643 AC104057.1-201ENST00000515547 497 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms