Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.25□□□□□ -1.89
GABPAQ06546 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
GABPAQ06546 RNU6-50P-201ENST00000362356 103 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 RNA5SP295-201ENST00000362655 121 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 RNU6-157P-201ENST00000383957 107 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 MIR34A-201ENST00000385130 110 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 CYCSP45-201ENST00000402289 315 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AP000567.1-201ENST00000406413 156 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GABPAQ06546 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 AL953862.1-201ENST00000423016 168 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 ZYG11AP1-201ENST00000430329 837 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 AL662791.1-201ENST00000441992 928 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.25□□□□□ -1.89
GABPAQ06546 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 AC090525.1-201ENST00000479116 478 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 RN7SL432P-201ENST00000484057 298 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.25□□□□□ -1.89
GABPAQ06546 RNU5A-4P-201ENST00000516588 111 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GABPAQ06546 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 HPRT1P3-201ENST00000539521 576 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.25□□□□□ -1.89
GABPAQ06546 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.25□□□□□ -1.89
GABPAQ06546 AC090615.1-201ENST00000577519 154 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 BBIP1P1-201ENST00000602999 279 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AP001330.4-201ENST00000604350 154 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AC011330.2-201ENST00000621680 635 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 AC079228.1-201ENST00000624774 1049 ntBASIC3.25□□□□□ -1.89
GABPAQ06546 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
GABPAQ06546 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABPAQ06546 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABPAQ06546 MIR449A-201ENST00000362113 91 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 RPS4XP8-201ENST00000402039 771 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 MTCYBP38-201ENST00000417160 1123 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.24□□□□□ -1.89
GABPAQ06546 EZH2P1-201ENST00000431167 291 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.24□□□□□ -1.89
GABPAQ06546 HMGB1P12-201ENST00000438594 598 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 AP000936.2-201ENST00000447151 681 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.24□□□□□ -1.89
GABPAQ06546 MEMO1P3-201ENST00000459811 302 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.24□□□□□ -1.89
GABPAQ06546 RPL21P104-201ENST00000464143 478 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.24□□□□□ -1.89
GABPAQ06546 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.24□□□□□ -1.89
GABPAQ06546 AC006445.2-201ENST00000510061 472 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 RNU4-29P-201ENST00000515943 174 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 SNRPGP16-201ENST00000533275 226 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 SYF2P1-201ENST00000550658 413 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 DUXAP1-201ENST00000556632 463 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC087465.1-201ENST00000560574 245 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.24□□□□□ -1.89
GABPAQ06546 AC009097.3-201ENST00000563557 1018 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 FAM60BP-201ENST00000578364 658 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.24□□□□□ -1.89
GABPAQ06546 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 DUXAP11-201ENST00000603858 526 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC025588.2-201ENST00000604851 466 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC004853.1-201ENST00000604902 698 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AL592221.1-201ENST00000605266 382 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 AC034229.4-201ENST00000607861 441 ntBASIC3.24□□□□□ -1.89
GABPAQ06546 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.24□□□□□ -1.89
GABPAQ06546 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
GABPAQ06546 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABPAQ06546 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GABPAQ06546 AL136360.1-201ENST00000503377 1900 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 DEFB109C-201ENST00000382575 264 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 DEFB109B-201ENST00000382656 264 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GABPAQ06546 SNORA48.8-201ENST00000391324 134 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AL356057.3-201ENST00000402607 340 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.23□□□□□ -1.89
GABPAQ06546 AL451074.5-201ENST00000415894 435 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 RPS24P7-201ENST00000416921 246 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 RPL22P18-201ENST00000417197 377 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 MTCO2P21-201ENST00000419780 677 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AL137014.1-201ENST00000420490 1226 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.23□□□□□ -1.89
GABPAQ06546 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.23□□□□□ -1.89
GABPAQ06546 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.23□□□□□ -1.89
GABPAQ06546 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.23□□□□□ -1.89
GABPAQ06546 MTND5P14-201ENST00000441481 1267 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms