Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.95□□□□□ -1.94
CCNA1P78396 SEPT14P24-201ENST00000447236 180 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 SUMO2P2-201ENST00000456482 255 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.95□□□□□ -1.94
CCNA1P78396 snoU13.26-201ENST00000459452 105 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.95□□□□□ -1.94
CCNA1P78396 AC022483.1-201ENST00000514020 567 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 SNORA48.10-201ENST00000516965 160 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 OR8K2P-201ENST00000524645 927 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCNA1P78396 AC006518.2-201ENST00000542513 940 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCNA1P78396 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCNA1P78396 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.95□□□□□ -1.94
CCNA1P78396 AC104763.2-201ENST00000604179 382 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 AC005046.1-201ENST00000608515 625 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 DUXAP10-204ENST00000612052 616 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.95□□□□□ -1.94
CCNA1P78396 MTCO1P4-201ENST00000520516 1409 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.94□□□□□ -1.94
CCNA1P78396 AC011816.1-201ENST00000441346 546 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 USP9YP34-201ENST00000453983 808 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 MTND4LP3-201ENST00000468320 276 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 SRIP1-201ENST00000489235 288 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 OR5BM1P-201ENST00000512021 366 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.94□□□□□ -1.94
CCNA1P78396 MTND2P31-201ENST00000512602 616 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.94□□□□□ -1.94
CCNA1P78396 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 RPPH1-2P-201ENST00000516688 293 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.94□□□□□ -1.94
CCNA1P78396 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.94□□□□□ -1.94
CCNA1P78396 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.94□□□□□ -1.94
CCNA1P78396 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.94□□□□□ -1.94
CCNA1P78396 AC007938.3-201ENST00000604965 623 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.94□□□□□ -1.94
CCNA1P78396 CRYM-AS1-204ENST00000637983 556 ntBASIC2.94□□□□□ -1.94
CCNA1P78396 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CCNA1P78396 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCNA1P78396 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCNA1P78396 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
CCNA1P78396 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CCNA1P78396 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CCNA1P78396 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCNA1P78396 MIR504-201ENST00000385065 83 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 RNA5SP425-201ENST00000410336 112 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 RNU2-47P-201ENST00000410649 186 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 RAC1P8-201ENST00000427086 527 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 AL390023.1-201ENST00000428836 262 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.93□□□□□ -1.94
CCNA1P78396 AC078857.1-201ENST00000469870 667 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.93□□□□□ -1.94
CCNA1P78396 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.93□□□□□ -1.94
CCNA1P78396 RN7SKP40-201ENST00000517211 242 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.93□□□□□ -1.94
CCNA1P78396 AC009063.1-201ENST00000563342 702 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 RPAP2P1-201ENST00000603626 1168 ntBASIC2.93□□□□□ -1.94
CCNA1P78396 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.93□□□□□ -1.94
CCNA1P78396 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CCNA1P78396 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCNA1P78396 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCNA1P78396 RNA5SP289-201ENST00000362332 137 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 MIR217-201ENST00000384817 110 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CCNA1P78396 RNU6-575P-201ENST00000411326 105 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 Z98742.3-201ENST00000418637 326 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 USP9YP20-201ENST00000419224 558 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 AC019178.2-201ENST00000423595 505 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 AC009237.8-201ENST00000445492 379 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.92□□□□□ -1.94
CCNA1P78396 VN1R10P-201ENST00000447106 875 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 FDX1P2-201ENST00000450769 375 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 snoU13.28-201ENST00000459235 104 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CCNA1P78396 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.92□□□□□ -1.94
CCNA1P78396 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.92□□□□□ -1.94
CCNA1P78396 AC113420.1-201ENST00000507903 571 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 RNU6-798P-201ENST00000516912 103 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.92□□□□□ -1.94
CCNA1P78396 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCNA1P78396 AC093510.2-201ENST00000562820 896 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 AMZ2P1-203ENST00000565833 850 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.92□□□□□ -1.94
CCNA1P78396 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.92□□□□□ -1.94
CCNA1P78396 AC091946.2-201ENST00000606105 291 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.92□□□□□ -1.94
CCNA1P78396 AC109315.1-201ENST00000584143 1347 ntBASIC2.92□□□□□ -1.94
CCNA1P78396 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms