Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SNORD37.1-201ENST00000390968 65 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RNU2-62P-201ENST00000410868 191 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 CYP4F29P-201ENST00000420685 446 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.72□□□□□ -1.65
HERVK_113P62684 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.72□□□□□ -1.65
HERVK_113P62684 NOTCH2P1-201ENST00000443481 624 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RPL7P12-201ENST00000446719 750 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AL118496.2-201ENST00000448300 230 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.72□□□□□ -1.65
HERVK_113P62684 AC087385.1-201ENST00000475062 312 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.72□□□□□ -1.65
HERVK_113P62684 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERVK_113P62684 TMEM248P1-201ENST00000510579 951 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 MTCO3P44-201ENST00000510977 541 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC005798.1-201ENST00000513715 387 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.72□□□□□ -1.65
HERVK_113P62684 SNORD60.2-201ENST00000516883 86 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RN7SKP277-201ENST00000516895 283 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 RNU6-798P-201ENST00000516912 103 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.72□□□□□ -1.65
HERVK_113P62684 OR5B19P-201ENST00000531766 928 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.72□□□□□ -1.65
HERVK_113P62684 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.72□□□□□ -1.65
HERVK_113P62684 AP001429.1-201ENST00000602568 530 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AL451044.1-201ENST00000604867 238 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC105429.2-201ENST00000610567 517 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 MIR6868-201ENST00000611215 58 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC244100.1-202ENST00000621554 382 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC005858.4-201ENST00000623191 700 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.72□□□□□ -1.65
HERVK_113P62684 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERVK_113P62684 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.72□□□□□ -1.65
HERVK_113P62684 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
HERVK_113P62684 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.72□□□□□ -1.65
HERVK_113P62684 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERVK_113P62684 RIOK3P1-201ENST00000418778 1528 ntBASIC4.72□□□□□ -1.65
HERVK_113P62684 AC011266.1-201ENST00000624119 3569 ntBASIC4.71□□□□□ -1.65
HERVK_113P62684 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.71□□□□□ -1.65
HERVK_113P62684 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HERVK_113P62684 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC006020.1-201ENST00000420179 1854 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERVK_113P62684 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HERVK_113P62684 SNORD74.4-201ENST00000364129 80 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 SNORD46.1-201ENST00000364139 104 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 Y_RNA.255-201ENST00000364581 97 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 SNORA73.2-201ENST00000364946 201 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RNU6-996P-201ENST00000365438 107 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 SNORA32.2-201ENST00000384049 122 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RNU6-278P-201ENST00000390945 109 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RNU6-332P-201ENST00000391193 108 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AL162578.1-201ENST00000406202 378 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 HMGN1P24-201ENST00000412282 298 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RAB9AP3-201ENST00000412737 573 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RPS20P15-201ENST00000412792 311 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 EEF1A1P40-201ENST00000412883 573 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 PDCL2P1-201ENST00000419302 352 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HERVK_113P62684 RPL35AP12-201ENST00000425362 338 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 RPL36AP53-201ENST00000432891 316 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RPS20P5-201ENST00000434808 360 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 TAAR7P-201ENST00000436141 242 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 RAB9AP1-201ENST00000449393 573 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC108059.3-201ENST00000456388 214 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC093278.1-201ENST00000494700 600 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 EIF4EP3-201ENST00000498782 656 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.71□□□□□ -1.66
HERVK_113P62684 RNU6-27P-201ENST00000516146 107 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 MYL12AP1-201ENST00000518490 515 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.71□□□□□ -1.66
HERVK_113P62684 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC037471.2-201ENST00000564941 598 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 MIR3944-201ENST00000581277 108 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AC091925.2-201ENST00000625059 256 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.71□□□□□ -1.66
HERVK_113P62684 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HERVK_113P62684 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AL157700.1-201ENST00000561973 1432 ntBASIC4.71□□□□□ -1.66
HERVK_113P62684 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HERVK_113P62684 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERVK_113P62684 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERVK_113P62684 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HERVK_113P62684 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HERVK_113P62684 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.7□□□□□ -1.66
HERVK_113P62684 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HERVK_113P62684 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HERVK_113P62684 snosnR66.1-201ENST00000391095 99 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 U3.29-201ENST00000391296 212 ntBASIC4.7□□□□□ -1.66
HERVK_113P62684 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms