Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 OSTCP8-201ENST00000445117 448 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.62□□□□□ -2.15
LSM3P62310 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM3P62310 AC087588.1-201ENST00000462203 316 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC126389.1-201ENST00000477436 290 ntBASIC1.62□□□□□ -2.15
LSM3P62310 RPL21P99-201ENST00000480369 423 ntBASIC1.62□□□□□ -2.15
LSM3P62310 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.62□□□□□ -2.15
LSM3P62310 RNU7-193P-201ENST00000516723 65 ntBASIC1.62□□□□□ -2.15
LSM3P62310 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
LSM3P62310 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LSM3P62310 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM3P62310 AC074029.2-201ENST00000551045 634 ntBASIC1.62□□□□□ -2.15
LSM3P62310 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.62□□□□□ -2.15
LSM3P62310 MIR1254-2-201ENST00000579553 63 ntBASIC1.62□□□□□ -2.15
LSM3P62310 MIR4429-201ENST00000580105 73 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LSM3P62310 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.62□□□□□ -2.15
LSM3P62310 MIMT1-201ENST00000597105 1050 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC096577.2-201ENST00000611455 153 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC025034.2-201ENST00000623264 286 ntBASIC1.62□□□□□ -2.15
LSM3P62310 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LSM3P62310 OR5H6-203ENST00000642105 978 ntBASIC1.62□□□□□ -2.15
LSM3P62310 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
LSM3P62310 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LSM3P62310 RNU6-543P-201ENST00000362576 108 ntBASIC1.61□□□□□ -2.15
LSM3P62310 RNU1-105P-201ENST00000363470 161 ntBASIC1.61□□□□□ -2.15
LSM3P62310 RNU6-444P-201ENST00000383988 108 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AL356057.1-202ENST00000402263 756 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.61□□□□□ -2.15
LSM3P62310 RPL7P44-201ENST00000424827 742 ntBASIC1.61□□□□□ -2.15
LSM3P62310 USP12PX-201ENST00000432383 1057 ntBASIC1.61□□□□□ -2.15
LSM3P62310 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.61□□□□□ -2.15
LSM3P62310 AL606490.8-201ENST00000441624 319 ntBASIC1.61□□□□□ -2.15
LSM3P62310 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.61□□□□□ -2.15
LSM3P62310 GPM6BP3-201ENST00000442797 145 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM3P62310 HMGN1P5-201ENST00000448591 263 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.61□□□□□ -2.15
LSM3P62310 RPS27P23-201ENST00000487608 251 ntBASIC1.61□□□□□ -2.15
LSM3P62310 RNU6-798P-201ENST00000516912 103 ntBASIC1.61□□□□□ -2.15
LSM3P62310 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM3P62310 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM3P62310 AP001646.1-201ENST00000527936 915 ntBASIC1.61□□□□□ -2.15
LSM3P62310 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM3P62310 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.61□□□□□ -2.15
LSM3P62310 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.61□□□□□ -2.15
LSM3P62310 AC040174.2-201ENST00000602701 465 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AL355812.1-201ENST00000603215 216 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AL022099.1-201ENST00000604551 712 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC012468.1-201ENST00000604888 430 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AP000254.1-201ENST00000609934 520 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC025016.1-201ENST00000616746 682 ntBASIC1.61□□□□□ -2.15
LSM3P62310 AC012150.2-201ENST00000621300 544 ntBASIC1.61□□□□□ -2.15
LSM3P62310 YWHAEP7-203ENST00000622054 312 ntBASIC1.61□□□□□ -2.15
LSM3P62310 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LSM3P62310 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LSM3P62310 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
LSM3P62310 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM3P62310 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LSM3P62310 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM3P62310 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.6□□□□□ -2.15
LSM3P62310 AL031679.1-201ENST00000400616 525 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AL079342.1-201ENST00000401460 267 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AL024474.1-201ENST00000404655 591 ntBASIC1.6□□□□□ -2.15
LSM3P62310 RN7SKP32-201ENST00000410167 303 ntBASIC1.6□□□□□ -2.15
LSM3P62310 RNU6-1328P-201ENST00000410938 106 ntBASIC1.6□□□□□ -2.15
LSM3P62310 RPS20P15-201ENST00000412792 311 ntBASIC1.6□□□□□ -2.15
LSM3P62310 HMGB3P31-201ENST00000413333 595 ntBASIC1.6□□□□□ -2.15
LSM3P62310 UBE2V1P9-201ENST00000414760 368 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM3P62310 AC004866.2-201ENST00000438285 481 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.6□□□□□ -2.15
LSM3P62310 OR4G11P-201ENST00000492842 939 ntBASIC1.6□□□□□ -2.15
LSM3P62310 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
LSM3P62310 RNU6-488P-201ENST00000515918 99 ntBASIC1.6□□□□□ -2.15
LSM3P62310 SCARNA17.1-201ENST00000516211 143 ntBASIC1.6□□□□□ -2.15
LSM3P62310 SCARNA17.2-201ENST00000516334 143 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.6□□□□□ -2.15
LSM3P62310 AC022616.2-201ENST00000523185 300 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AC118942.1-201ENST00000529674 1035 ntBASIC1.6□□□□□ -2.15
LSM3P62310 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM3P62310 AC012443.1-201ENST00000605605 231 ntBASIC1.6□□□□□ -2.15
LSM3P62310 SCARNA17.4-201ENST00000614296 143 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AC116618.1-201ENST00000634617 774 ntBASIC1.6□□□□□ -2.15
LSM3P62310 AL390862.1-201ENST00000635467 1469 ntBASIC1.6□□□□□ -2.15
LSM3P62310 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.6□□□□□ -2.15
LSM3P62310 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
LSM3P62310 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
LSM3P62310 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LSM3P62310 SNORA38-201ENST00000363946 132 ntBASIC1.59□□□□□ -2.15
LSM3P62310 RNU6-7-201ENST00000364784 107 ntBASIC1.59□□□□□ -2.15
LSM3P62310 RNU6-234P-201ENST00000365229 104 ntBASIC1.59□□□□□ -2.15
LSM3P62310 RNU6-8-201ENST00000365467 107 ntBASIC1.59□□□□□ -2.15
LSM3P62310 CIR1P3-201ENST00000405137 479 ntBASIC1.59□□□□□ -2.15
LSM3P62310 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.59□□□□□ -2.15
LSM3P62310 AL109913.1-201ENST00000421173 514 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC099548.1-201ENST00000421443 426 ntBASIC1.59□□□□□ -2.15
LSM3P62310 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms