Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MRPS18BP2-201ENST00000434310 759 ntBASIC2.99□□□□□ -1.93
LMO4P61968 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 Z82190.1-201ENST00000454534 490 ntBASIC2.99□□□□□ -1.93
LMO4P61968 OR6K1P-201ENST00000456766 971 ntBASIC2.99□□□□□ -1.93
LMO4P61968 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 RPS3AP14-201ENST00000483907 780 ntBASIC2.99□□□□□ -1.93
LMO4P61968 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.99□□□□□ -1.93
LMO4P61968 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.99□□□□□ -1.93
LMO4P61968 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 AC009646.1-201ENST00000510455 318 ntBASIC2.99□□□□□ -1.93
LMO4P61968 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.99□□□□□ -1.93
LMO4P61968 SNORA70.18-201ENST00000516696 98 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AP001893.2-201ENST00000526949 202 ntBASIC2.99□□□□□ -1.93
LMO4P61968 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 AC104383.1-201ENST00000530297 370 ntBASIC2.99□□□□□ -1.93
LMO4P61968 CBX3P5-201ENST00000552017 521 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 RPL21P5-201ENST00000554662 472 ntBASIC2.99□□□□□ -1.93
LMO4P61968 FGF7P1-201ENST00000582820 288 ntBASIC2.99□□□□□ -1.93
LMO4P61968 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.99□□□□□ -1.93
LMO4P61968 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 AC008638.3-201ENST00000603341 463 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC009994.1-201ENST00000606889 253 ntBASIC2.99□□□□□ -1.93
LMO4P61968 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 MIR7851-201ENST00000610611 160 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC078899.5-201ENST00000612475 178 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.99□□□□□ -1.93
LMO4P61968 AL732618.1-201ENST00000623251 301 ntBASIC2.99□□□□□ -1.93
LMO4P61968 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.99□□□□□ -1.93
LMO4P61968 CR381572.1-201ENST00000625098 102 ntBASIC2.99□□□□□ -1.93
LMO4P61968 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 BDP1P-201ENST00000582658 1990 ntBASIC2.99□□□□□ -1.93
LMO4P61968 AL354685.2-201ENST00000448218 1447 ntBASIC2.99□□□□□ -1.93
LMO4P61968 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 MAPK10-373ENST00000641983 6772 ntBASIC2.99□□□□□ -1.93
LMO4P61968 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.99□□□□□ -1.93
LMO4P61968 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LMO4P61968 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 RNU6-600P-201ENST00000362524 99 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RNA5SP502-201ENST00000362694 119 ntBASIC2.98□□□□□ -1.93
LMO4P61968 Y_RNA.813-201ENST00000364639 102 ntBASIC2.98□□□□□ -1.93
LMO4P61968 Y_RNA.402-201ENST00000383972 102 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RNU6-769P-201ENST00000384407 104 ntBASIC2.98□□□□□ -1.93
LMO4P61968 MIR3074-201ENST00000384885 81 ntBASIC2.98□□□□□ -1.93
LMO4P61968 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LMO4P61968 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 MTHFD2P2-201ENST00000407725 247 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RNU4-55P-201ENST00000410731 137 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RNU6-195P-201ENST00000411352 109 ntBASIC2.98□□□□□ -1.93
LMO4P61968 BX295541.1-201ENST00000417774 250 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 BX842559.1-201ENST00000419615 532 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 AL445669.1-201ENST00000426743 755 ntBASIC2.98□□□□□ -1.93
LMO4P61968 ATP5JP1-201ENST00000431631 322 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RPL23AP83-201ENST00000434984 473 ntBASIC2.98□□□□□ -1.93
LMO4P61968 NDUFB1P1-201ENST00000435191 180 ntBASIC2.98□□□□□ -1.93
LMO4P61968 MTCYBP45-201ENST00000435243 565 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC009961.2-201ENST00000435771 251 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RABEPKP1-201ENST00000440529 1026 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 USP9YP8-201ENST00000441913 500 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 AC099563.1-201ENST00000456086 418 ntBASIC2.98□□□□□ -1.93
LMO4P61968 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 AC092451.1-201ENST00000480211 153 ntBASIC2.98□□□□□ -1.93
LMO4P61968 RPL31P13-201ENST00000484151 370 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 AC106872.3-201ENST00000495104 446 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 AC026784.1-201ENST00000507986 352 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 AC026412.2-201ENST00000512270 1075 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 RN7SKP209-201ENST00000516888 304 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AP003467.2-201ENST00000520175 319 ntBASIC2.98□□□□□ -1.93
LMO4P61968 OR5AP1P-201ENST00000529730 940 ntBASIC2.98□□□□□ -1.93
LMO4P61968 OR5D17P-201ENST00000531492 978 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.98□□□□□ -1.93
LMO4P61968 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 HMGB1P33-201ENST00000563485 527 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AL391840.1-201ENST00000571144 367 ntBASIC2.98□□□□□ -1.93
LMO4P61968 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 AC007687.1-201ENST00000602704 304 ntBASIC2.98□□□□□ -1.93
LMO4P61968 C8orf59P2-201ENST00000603441 271 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AL139395.1-201ENST00000603662 160 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms