Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDL3P58872 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC007656.2-201ENST00000624902 4547 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 RNU4-35P-201ENST00000362588 141 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 RNA5SP50-201ENST00000363731 107 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 SNORD17-201ENST00000390930 237 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 Z98941.1-201ENST00000407764 100 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 RPL7P8-201ENST00000411964 730 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 HSFY4P-201ENST00000415994 1181 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 NEK4P1-201ENST00000433383 879 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 RPS3AP12-201ENST00000443616 753 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 KATNBL1P6-201ENST00000453433 915 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDL3P58872 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC025518.1-201ENST00000479856 347 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 SNORA31.1-201ENST00000515993 133 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 SNORA31.5-201ENST00000516190 133 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 RN7SKP209-201ENST00000516888 304 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC093012.1-202ENST00000549403 582 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC107016.1-201ENST00000550463 337 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AL606834.2-201ENST00000602954 668 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AL022161.1-201ENST00000604390 213 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC121247.2-201ENST00000604776 136 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 BRDTP1-201ENST00000605735 677 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AL355472.4-201ENST00000610233 626 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC090132.2-201ENST00000615881 347 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AL355365.1-201ENST00000616480 294 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 U4.6-201ENST00000621618 127 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 AC027309.3-201ENST00000623419 351 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 AC007494.3-201ENST00000624660 743 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
RHBDL3P58872 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RHBDL3P58872 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.26□□□□□ -1.73
RHBDL3P58872 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RHBDL3P58872 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 RNU6-741P-201ENST00000383889 107 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 CCNG1P1-201ENST00000406783 885 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC078974.1-201ENST00000411597 223 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AL158156.1-201ENST00000422509 473 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDL3P58872 HMGN2P13-201ENST00000476476 274 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC116337.2-201ENST00000477662 156 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RPS3AP43-201ENST00000479743 781 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 BET1P1-201ENST00000482276 359 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC139783.2-201ENST00000504847 1145 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AF131216.2-201ENST00000512316 564 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RNU6-390P-201ENST00000516259 103 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RNU6-1256P-201ENST00000516539 103 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RNU6-711P-201ENST00000517255 106 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.25□□□□□ -1.73
RHBDL3P58872 AC091953.5-201ENST00000622919 233 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.25□□□□□ -1.73
RHBDL3P58872 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 MTND4P4-201ENST00000439033 1366 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 MTND5P1-201ENST00000445440 1375 ntBASIC4.25□□□□□ -1.73
RHBDL3P58872 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RHBDL3P58872 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RHBDL3P58872 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.24□□□□□ -1.73
RHBDL3P58872 AC021755.1-201ENST00000559747 1447 ntBASIC4.24□□□□□ -1.73
RHBDL3P58872 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms