Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 DUTP6-201ENST00000425573 462 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 MTCO1P39-201ENST00000426148 480 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AP000907.1-201ENST00000428428 510 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 NDUFB1P1-201ENST00000435191 180 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 ARPC3P1-201ENST00000437218 533 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC004866.2-201ENST00000438285 481 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN2P57739 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC135721.1-201ENST00000497954 479 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 KCTD9P5-201ENST00000504141 1170 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC010342.1-201ENST00000514047 877 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 RNU6-430P-201ENST00000517078 107 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 RANP9-201ENST00000519957 271 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLDN2P57739 AP004242.1-201ENST00000533701 349 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC022880.1-201ENST00000534017 973 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN2P57739 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN2P57739 EIF1P4-201ENST00000572664 335 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN2P57739 AC006116.10-201ENST00000591836 581 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC068790.6-201ENST00000602558 258 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC245014.2-201ENST00000603689 287 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 AC246785.4-201ENST00000605374 287 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 BRDTP1-201ENST00000605735 677 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN2P57739 AL450472.3-201ENST00000615578 367 ntBASIC3.59□□□□□ -1.83
CLDN2P57739 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.59□□□□□ -1.84
CLDN2P57739 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CLDN2P57739 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN2P57739 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 XIAPP3-201ENST00000312918 795 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 RNU6-259P-201ENST00000383999 107 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 MIR708-201ENST00000390708 88 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 RNU6-192P-201ENST00000391253 100 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 LAP3P1-201ENST00000403648 294 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 BX842559.1-201ENST00000419615 532 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC019097.1-201ENST00000424783 735 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC137499.1-201ENST00000427602 88 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 CYCSP4-201ENST00000429682 331 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC119618.1-201ENST00000434191 222 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC090774.1-201ENST00000435925 246 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 AL136380.1-201ENST00000447970 162 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 AC011825.1-201ENST00000484967 388 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC105252.1-201ENST00000503089 286 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC010587.1-201ENST00000505809 469 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLDN2P57739 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN2P57739 AC103843.2-201ENST00000530523 682 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN2P57739 AC009063.1-201ENST00000563342 702 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN2P57739 MIR3913-1-201ENST00000577744 102 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 FAM60BP-201ENST00000578364 658 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 VN1R79P-201ENST00000593540 513 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 AL161729.4-201ENST00000604650 476 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC008277.2-201ENST00000605196 797 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AL034351.1-201ENST00000605288 668 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC098614.4-201ENST00000607601 462 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC099842.1-201ENST00000619919 596 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN2P57739 AC091905.1-201ENST00000624400 311 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 AC138915.3-201ENST00000562908 1389 ntBASIC3.58□□□□□ -1.84
CLDN2P57739 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN2P57739 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN2P57739 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN2P57739 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN2P57739 USP8P1-201ENST00000494673 3183 ntBASIC3.57□□□□□ -1.84
CLDN2P57739 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CLDN2P57739 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms