Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDH13P55290 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH13P55290 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH13P55290 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 SNORA23-201ENST00000365128 182 ntBASIC3.33□□□□□ -1.88
CDH13P55290 RPS20P2-201ENST00000402520 389 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AC126124.2-201ENST00000413542 321 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 AC009518.2-201ENST00000418056 731 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AC018630.2-202ENST00000422992 927 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AL356867.1-201ENST00000429623 299 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AL445584.1-201ENST00000431451 330 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH13P55290 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH13P55290 RPL23AP67-201ENST00000465341 474 ntBASIC3.33□□□□□ -1.88
CDH13P55290 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
CDH13P55290 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH13P55290 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 CDC42P4-201ENST00000510507 563 ntBASIC3.33□□□□□ -1.88
CDH13P55290 Y_RNA.688-201ENST00000516565 95 ntBASIC3.33□□□□□ -1.88
CDH13P55290 CCNG2P1-201ENST00000549521 1000 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 RPL23AP84-201ENST00000571193 464 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 AL020997.2-201ENST00000602607 184 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AP000254.1-201ENST00000609934 520 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH13P55290 AL121772.2-201ENST00000614331 297 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AC013476.2-201ENST00000614456 459 ntBASIC3.33□□□□□ -1.88
CDH13P55290 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.33□□□□□ -1.88
CDH13P55290 AC112204.3-201ENST00000623822 332 ntBASIC3.33□□□□□ -1.88
CDH13P55290 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH13P55290 AC138915.3-201ENST00000562908 1389 ntBASIC3.33□□□□□ -1.88
CDH13P55290 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH13P55290 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH13P55290 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH13P55290 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH13P55290 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
CDH13P55290 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
CDH13P55290 RNU5F-7P-201ENST00000363696 115 ntBASIC3.32□□□□□ -1.88
CDH13P55290 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
CDH13P55290 RNU5E-5P-201ENST00000365379 116 ntBASIC3.32□□□□□ -1.88
CDH13P55290 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CDH13P55290 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 RNU6-533P-201ENST00000384144 107 ntBASIC3.32□□□□□ -1.88
CDH13P55290 RNU6-809P-201ENST00000384461 107 ntBASIC3.32□□□□□ -1.88
CDH13P55290 MT-TH-201ENST00000387441 69 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 NDUFB4P7-201ENST00000423198 363 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH13P55290 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH13P55290 AC008264.1-201ENST00000447612 367 ntBASIC3.32□□□□□ -1.88
CDH13P55290 SNRPFP4-201ENST00000456366 242 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CDH13P55290 ACTR3P3-201ENST00000480448 893 ntBASIC3.32□□□□□ -1.88
CDH13P55290 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
CDH13P55290 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH13P55290 MIR5697-201ENST00000578045 78 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH13P55290 ZNF415P1-201ENST00000582279 1166 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AL359999.1-201ENST00000604513 294 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC105129.3-201ENST00000605455 485 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AL031775.1-201ENST00000607014 887 ntBASIC3.32□□□□□ -1.88
CDH13P55290 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 MIR8058-201ENST00000615737 89 ntBASIC3.32□□□□□ -1.88
CDH13P55290 AC009159.1-201ENST00000618386 642 ntBASIC3.32□□□□□ -1.88
CDH13P55290 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH13P55290 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH13P55290 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDH13P55290 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 ZNF285B-201ENST00000561698 1767 ntBASIC3.31□□□□□ -1.88
CDH13P55290 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH13P55290 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms