Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 Y_RNA.128-201ENST00000363391 112 ntBASIC4.91□□□□□ -1.62
PMS1P54277 SNORD113-7-201ENST00000363762 77 ntBASIC4.91□□□□□ -1.62
PMS1P54277 RNU6-82P-201ENST00000363970 107 ntBASIC4.91□□□□□ -1.62
PMS1P54277 MIR548F5-201ENST00000408421 86 ntBASIC4.91□□□□□ -1.62
PMS1P54277 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.91□□□□□ -1.62
PMS1P54277 RPL30P2-201ENST00000414021 291 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.91□□□□□ -1.62
PMS1P54277 CALM2P2-201ENST00000428512 440 ntBASIC4.91□□□□□ -1.62
PMS1P54277 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.91□□□□□ -1.62
PMS1P54277 AC016712.1-201ENST00000431088 378 ntBASIC4.91□□□□□ -1.62
PMS1P54277 MTCO3P45-201ENST00000443036 613 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC020550.1-201ENST00000447385 163 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.91□□□□□ -1.62
PMS1P54277 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.91□□□□□ -1.62
PMS1P54277 RN7SL41P-201ENST00000476144 297 ntBASIC4.91□□□□□ -1.62
PMS1P54277 RPL39P5-202ENST00000512505 151 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AP000889.2-201ENST00000532684 490 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.91□□□□□ -1.62
PMS1P54277 AL161713.1-201ENST00000555538 145 ntBASIC4.91□□□□□ -1.62
PMS1P54277 RPL23AP97-201ENST00000568955 471 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
PMS1P54277 MIR4480-201ENST00000582492 71 ntBASIC4.91□□□□□ -1.62
PMS1P54277 MIR3171-201ENST00000584270 74 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC092747.3-201ENST00000603769 301 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AP001836.1-201ENST00000604675 523 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC245389.1-201ENST00000605141 529 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AL034351.1-201ENST00000605288 668 ntBASIC4.91□□□□□ -1.62
PMS1P54277 Z82243.1-201ENST00000609432 473 ntBASIC4.91□□□□□ -1.62
PMS1P54277 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.91□□□□□ -1.62
PMS1P54277 AC007546.1-201ENST00000619452 559 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC110801.1-201ENST00000623590 212 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC007546.2-201ENST00000623996 360 ntBASIC4.91□□□□□ -1.62
PMS1P54277 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PMS1P54277 AC125257.1-201ENST00000560400 2930 ntBASIC4.91□□□□□ -1.62
PMS1P54277 AC121333.1-201ENST00000567488 2709 ntBASIC4.91□□□□□ -1.62
PMS1P54277 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PMS1P54277 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PMS1P54277 MTCO1P24-201ENST00000515438 1558 ntBASIC4.91□□□□□ -1.62
PMS1P54277 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PMS1P54277 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PMS1P54277 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
PMS1P54277 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.9□□□□□ -1.62
PMS1P54277 AC116667.1-201ENST00000604855 2072 ntBASIC4.9□□□□□ -1.62
PMS1P54277 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PMS1P54277 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
PMS1P54277 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PMS1P54277 RNA5SP307-201ENST00000362863 116 ntBASIC4.9□□□□□ -1.63
PMS1P54277 RNU6-1252P-201ENST00000363054 104 ntBASIC4.9□□□□□ -1.63
PMS1P54277 Y_RNA.167-201ENST00000363735 109 ntBASIC4.9□□□□□ -1.63
PMS1P54277 RNA5SP22-201ENST00000365393 109 ntBASIC4.9□□□□□ -1.63
PMS1P54277 SNORA4.3-201ENST00000365564 137 ntBASIC4.9□□□□□ -1.63
PMS1P54277 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.9□□□□□ -1.63
PMS1P54277 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PMS1P54277 RNU6-550P-201ENST00000391057 101 ntBASIC4.9□□□□□ -1.63
PMS1P54277 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.9□□□□□ -1.63
PMS1P54277 SNORA74C-2-201ENST00000411179 201 ntBASIC4.9□□□□□ -1.63
PMS1P54277 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.9□□□□□ -1.63
PMS1P54277 POLHP1-201ENST00000411806 470 ntBASIC4.9□□□□□ -1.63
PMS1P54277 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.9□□□□□ -1.63
PMS1P54277 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.9□□□□□ -1.63
PMS1P54277 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.9□□□□□ -1.63
PMS1P54277 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.9□□□□□ -1.63
PMS1P54277 AC012181.1-201ENST00000479895 423 ntBASIC4.9□□□□□ -1.63
PMS1P54277 AC027575.1-201ENST00000481064 460 ntBASIC4.9□□□□□ -1.63
PMS1P54277 Y_RNA.718-201ENST00000517110 102 ntBASIC4.9□□□□□ -1.63
PMS1P54277 TRMT10BP1-201ENST00000519377 943 ntBASIC4.9□□□□□ -1.63
PMS1P54277 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.9□□□□□ -1.63
PMS1P54277 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.9□□□□□ -1.63
PMS1P54277 AF038458.1-201ENST00000588406 262 ntBASIC4.9□□□□□ -1.63
PMS1P54277 AC024940.4-201ENST00000605507 246 ntBASIC4.9□□□□□ -1.63
PMS1P54277 Z98200.1-201ENST00000607298 470 ntBASIC4.9□□□□□ -1.63
PMS1P54277 MIR6130-201ENST00000619419 109 ntBASIC4.9□□□□□ -1.63
PMS1P54277 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
PMS1P54277 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.9□□□□□ -1.63
PMS1P54277 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PMS1P54277 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
PMS1P54277 AC000123.3-201ENST00000624029 4975 ntBASIC4.89□□□□□ -1.63
PMS1P54277 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PMS1P54277 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.89□□□□□ -1.63
PMS1P54277 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PMS1P54277 OR51H2P-202ENST00000641424 3046 ntBASIC4.89□□□□□ -1.63
PMS1P54277 EIF2AP4-201ENST00000424793 1781 ntBASIC4.89□□□□□ -1.63
PMS1P54277 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.89□□□□□ -1.63
PMS1P54277 MIR369-201ENST00000362155 70 ntBASIC4.89□□□□□ -1.63
PMS1P54277 SNORD113.2-201ENST00000364166 89 ntBASIC4.89□□□□□ -1.63
PMS1P54277 Y_RNA.339-201ENST00000365325 102 ntBASIC4.89□□□□□ -1.63
PMS1P54277 RNU6-946P-201ENST00000383878 107 ntBASIC4.89□□□□□ -1.63
PMS1P54277 MIR559-201ENST00000385188 96 ntBASIC4.89□□□□□ -1.63
PMS1P54277 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PMS1P54277 MIR298-201ENST00000401212 88 ntBASIC4.89□□□□□ -1.63
PMS1P54277 RNA5SP146-201ENST00000410743 123 ntBASIC4.89□□□□□ -1.63
PMS1P54277 AC074085.1-201ENST00000413598 418 ntBASIC4.89□□□□□ -1.63
PMS1P54277 VN1R36P-201ENST00000414936 291 ntBASIC4.89□□□□□ -1.63
PMS1P54277 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.89□□□□□ -1.63
PMS1P54277 MRPS18BP2-201ENST00000434310 759 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms