Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL672167.1-206ENST00000356293 943 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 RNU1-140P-201ENST00000365040 165 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK1P53667 RNU6-1027P-201ENST00000383998 107 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 U3.42-201ENST00000408746 214 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 RNU4-47P-201ENST00000410876 114 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 AL593851.1-201ENST00000426171 157 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 OR4K11P-201ENST00000431829 904 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.45□□□□□ -1.86
LIMK1P53667 AC112653.1-201ENST00000443851 386 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 MTCYBP3-201ENST00000445588 1137 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK1P53667 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 AL139824.2-201ENST00000458731 1095 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC021382.1-201ENST00000483523 359 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 POU5F1P7-201ENST00000508759 541 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK1P53667 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK1P53667 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.45□□□□□ -1.86
LIMK1P53667 RNU6-528P-201ENST00000516926 100 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.45□□□□□ -1.86
LIMK1P53667 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
LIMK1P53667 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.45□□□□□ -1.86
LIMK1P53667 OR7K1P-201ENST00000546439 926 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.45□□□□□ -1.86
LIMK1P53667 MED28P6-201ENST00000558776 231 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC002400.1-201ENST00000569310 726 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 MIR3945-201ENST00000581853 98 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC021171.1-201ENST00000603137 706 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AL353778.1-201ENST00000603149 408 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AL357094.1-201ENST00000603845 844 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 Z99289.3-201ENST00000605586 594 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AL158211.4-201ENST00000606988 584 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC093732.2-201ENST00000607950 274 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC002550.2-201ENST00000621246 394 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 AC007671.2-201ENST00000637344 619 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LIMK1P53667 AC006504.1-201ENST00000562493 3666 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 AC092435.3-201ENST00000565538 3654 ntBASIC3.45□□□□□ -1.86
LIMK1P53667 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.45□□□□□ -1.86
LIMK1P53667 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 AL391994.1-201ENST00000254724 282 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 RNU6-1078P-201ENST00000364522 103 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 Y_RNA.302-201ENST00000364997 102 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC107083.1-201ENST00000439643 279 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC034222.1-201ENST00000494052 532 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 LTV1P1-201ENST00000510683 1237 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.44□□□□□ -1.86
LIMK1P53667 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC013828.2-201ENST00000532487 235 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC004024.1-201ENST00000549244 247 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.44□□□□□ -1.86
LIMK1P53667 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 MTND3P12-201ENST00000559068 328 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC136618.2-201ENST00000575091 400 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 AC013444.2-201ENST00000603317 787 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC012443.1-201ENST00000605605 231 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AL353748.2-201ENST00000622148 471 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 AC008443.7-201ENST00000622195 246 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.44□□□□□ -1.86
LIMK1P53667 MAPK10-322ENST00000641485 4530 ntBASIC3.44□□□□□ -1.86
LIMK1P53667 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LIMK1P53667 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LIMK1P53667 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.44□□□□□ -1.86
LIMK1P53667 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK1P53667 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIMK1P53667 MTND4P16-201ENST00000466108 1367 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 AC011460.1-201ENST00000636268 1834 ntBASIC3.43□□□□□ -1.86
LIMK1P53667 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms