Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MTND1P5-201ENST00000517906 940 ntBASIC3.43□□□□□ -1.86
CLK1P49759 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.43□□□□□ -1.86
CLK1P49759 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.43□□□□□ -1.86
CLK1P49759 HIGD1AP1-201ENST00000550979 275 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.43□□□□□ -1.86
CLK1P49759 AC027807.1-201ENST00000559921 996 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC006960.3-201ENST00000561845 705 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK1P49759 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK1P49759 MTCYBP22-201ENST00000603788 447 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AL136363.2-201ENST00000604173 851 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC019159.1-201ENST00000605094 187 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC005332.10-201ENST00000612725 619 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC025594.3-201ENST00000613068 790 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC005344.1-201ENST00000613391 459 ntBASIC3.43□□□□□ -1.86
CLK1P49759 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.43□□□□□ -1.86
CLK1P49759 AL359740.1-201ENST00000624340 592 ntBASIC3.43□□□□□ -1.86
CLK1P49759 AC120349.2-201ENST00000625002 298 ntBASIC3.43□□□□□ -1.86
CLK1P49759 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.43□□□□□ -1.86
CLK1P49759 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLK1P49759 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.43□□□□□ -1.86
CLK1P49759 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
CLK1P49759 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLK1P49759 AL161912.2-201ENST00000565707 3007 ntBASIC3.43□□□□□ -1.86
CLK1P49759 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CLK1P49759 AP004289.2-201ENST00000444413 1457 ntBASIC3.42□□□□□ -1.86
CLK1P49759 CDR1-202ENST00000625883 1485 ntBASIC3.42□□□□□ -1.86
CLK1P49759 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.42□□□□□ -1.86
CLK1P49759 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
CLK1P49759 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLK1P49759 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 SNORD56.5-201ENST00000364281 72 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNU6-660P-201ENST00000364566 109 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNA5SP424-201ENST00000390988 115 ntBASIC3.42□□□□□ -1.86
CLK1P49759 SNORA57.1-201ENST00000391227 145 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNA5SP354-201ENST00000391247 136 ntBASIC3.42□□□□□ -1.86
CLK1P49759 DEFB108C-201ENST00000400154 252 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AF274854.1-201ENST00000413236 615 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC069157.1-201ENST00000421749 137 ntBASIC3.42□□□□□ -1.86
CLK1P49759 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
CLK1P49759 ARPC3P1-201ENST00000437218 533 ntBASIC3.42□□□□□ -1.86
CLK1P49759 MTND1P30-201ENST00000441241 901 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RPL39P6-201ENST00000448289 150 ntBASIC3.42□□□□□ -1.86
CLK1P49759 EPS15P1-201ENST00000448836 336 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNU6-420P-201ENST00000458780 107 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNU6-956P-201ENST00000458868 103 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AP001992.1-205ENST00000462248 379 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC006499.5-201ENST00000505037 514 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AF213884.2-201ENST00000510417 903 ntBASIC3.42□□□□□ -1.86
CLK1P49759 RNU6-720P-201ENST00000516363 108 ntBASIC3.42□□□□□ -1.86
CLK1P49759 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
CLK1P49759 SLC2A13P1-201ENST00000531560 322 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AP000873.5-201ENST00000533906 236 ntBASIC3.42□□□□□ -1.86
CLK1P49759 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.42□□□□□ -1.86
CLK1P49759 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 AC010546.1-201ENST00000569391 485 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 MIR5187-201ENST00000583479 76 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.42□□□□□ -1.86
CLK1P49759 VN1R85P-201ENST00000601587 426 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC067959.1-201ENST00000604334 379 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC069304.2-201ENST00000605154 435 ntBASIC3.42□□□□□ -1.86
CLK1P49759 SNORA62.6-201ENST00000606322 83 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.42□□□□□ -1.86
CLK1P49759 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
CLK1P49759 AC100793.4-201ENST00000613683 429 ntBASIC3.42□□□□□ -1.86
CLK1P49759 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 AC068831.8-201ENST00000620171 435 ntBASIC3.42□□□□□ -1.86
CLK1P49759 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
CLK1P49759 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLK1P49759 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CLK1P49759 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLK1P49759 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RNU6-433P-201ENST00000363216 104 ntBASIC3.41□□□□□ -1.86
CLK1P49759 SNORA75-201ENST00000384158 137 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RNU6-198P-201ENST00000384258 104 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RNU2-16P-201ENST00000410712 136 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL663109.1-201ENST00000411498 844 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.41□□□□□ -1.86
CLK1P49759 CDK8P2-201ENST00000415020 547 ntBASIC3.41□□□□□ -1.86
CLK1P49759 MTCYBP38-201ENST00000417160 1123 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC245054.1-201ENST00000420944 258 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK1P49759 AC006989.1-201ENST00000427212 131 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK1P49759 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms